Noise propagation in gene networks JM Pedraza, A van Oudenaarden Science 307 (5717), 1965-1969, 2005 | 1045 | 2005 |
Effects of molecular memory and bursting on fluctuations in gene expression JM Pedraza, J Paulsson Science 319 (5861), 339-343, 2008 | 479 | 2008 |
Predicting stochastic gene expression dynamics in single cells JT Mettetal, D Muzzey, JM Pedraza, EM Ozbudak, A Van Oudenaarden Proceedings of the National Academy of Sciences 103 (19), 7304-7309, 2006 | 223 | 2006 |
Building a morbidostat: an automated continuous-culture device for studying bacterial drug resistance under dynamically sustained drug inhibition E Toprak, A Veres, S Yildiz, JM Pedraza, R Chait, J Paulsson, R Kishony Nature protocols 8 (3), 555-567, 2013 | 188 | 2013 |
Stochastic gene expression out-of-steady-state in the cyanobacterial circadian clock JR Chabot, JM Pedraza, P Luitel, A Van Oudenaarden Nature 450 (7173), 1249-1252, 2007 | 175 | 2007 |
Novel protocol for persister cells isolation SJ Canas-Duarte, S Restrepo, JM Pedraza PLoS One 9 (2), e88660, 2014 | 67 | 2014 |
Tuning the range and stability of multiple phenotypic states with coupled positive–negative feedback loops MS Avendaño, C Leidy, JM Pedraza Nature communications 4 (1), 2605, 2013 | 48 | 2013 |
Unification of cell division control strategies through continuous rate models C Nieto, J Arias-Castro, C Sánchez, C Vargas-García, JM Pedraza Physical Review E 101 (2), 022401, 2020 | 46 | 2020 |
Random timing in signaling cascades JM Pedraza, J Paulsson Molecular systems biology 3 (1), 81, 2007 | 28 | 2007 |
Efficient computation of stochastic cell-size transient dynamics CA Nieto-Acuna, CA Vargas-Garcia, A Singh, JM Pedraza BMC bioinformatics 20 (Suppl 23), 647, 2019 | 22 | 2019 |
v Oudenaarden A (2005) Noise propagation in gene networks JM Pedraza Science 307, 1965-1969, 1969 | 18 | 1969 |
Continuous rate modeling of bacterial stochastic size dynamics C Nieto, C Vargas-Garcia, JM Pedraza Physical Review E 104 (4), 044415, 2021 | 17 | 2021 |
Slipstreaming mother machine: a microfluidic device for single-cell dynamic imaging of yeast DC Durán, CA Hernández, E Suesca, R Acevedo, IM Acosta, DA Forero, ... Micromachines 12 (1), 4, 2020 | 14 | 2020 |
Correlation between protein concentration and bacterial cell size can reveal mechanisms of gene expression C Nieto-Acuña, JC Arias-Castro, C Vargas-García, C Sánchez, ... Physical Biology 17 (4), 045002, 2020 | 13 | 2020 |
Predicting the last zero of a spectrally negative Lévy process EJ Baurdoux, JM Pedraza XIII Symposium on Probability and Stochastic Processes: UNAM, Mexico …, 2020 | 8 | 2020 |
Smart pooling: AI-powered COVID-19 informative group testing M Escobar, G Jeanneret, L Bravo-Sánchez, A Castillo, C Gómez, ... Scientific Reports 12 (1), 6519, 2022 | 7 | 2022 |
Pyecolib: a python library for simulating stochastic cell size dynamics C Nieto, SC Blanco, C Vargas-García, A Singh, PJ Manuel Physical Biology 20 (4), 045006, 2023 | 6 | 2023 |
Cell size control shapes fluctuations in colony population C Nieto, C Vargas-García, JM Pedraza, A Singh 2022 IEEE 61st Conference on Decision and Control (CDC), 3219-3224, 2022 | 6 | 2022 |
PyEcoLib: a python library for simulating E. coli stochastic size dynamics C Blanco, C Nieto, C Vargas, J Pedraza bioRxiv, 2020.09. 29.319152, 2020 | 6 | 2020 |
Mechanisms of cell size regulation in slow-growing Escherichia coli cells: discriminating models beyond the adder C Nieto, CA Vargas-García, JM Pedraza, A Singh npj Systems Biology and Applications 10 (1), 61, 2024 | 5 | 2024 |