Kenny Helsens
Kenny Helsens
PhD, Research Data Scientist, Team Lead
Verified email at - Homepage
Cited by
Cited by
Improved visualization of protein consensus sequences by iceLogo
N Colaert, K Helsens, L Martens, J Vandekerckhove, K Gevaert
Nature methods 6 (11), 786-787, 2009
LNCipedia: a database for annotated human lncRNA transcript sequences and structures
PJ Volders, K Helsens, X Wang, B Menten, L Martens, K Gevaert, ...
Nucleic acids research 41 (D1), D246-D251, 2013
Proteomics analyses reveal the evolutionary conservation and divergence of N-terminal acetyltransferases from yeast and humans
T Arnesen, P Van Damme, B Polevoda, K Helsens, R Evjenth, N Colaert, ...
Proceedings of the National Academy of Sciences 106 (20), 8157-8162, 2009
NatF contributes to an evolutionary shift in protein N-terminal acetylation and is important for normal chromosome segregation
P Van Damme, K Hole, A Pimenta-Marques, K Helsens, ...
PLoS genetics 7 (7), e1002169, 2011
Human Proteinpedia enables sharing of human protein data
S Mathivanan, M Ahmed, NG Ahn, H Alexandre, R Amanchy, PC Andrews, ...
Nature biotechnology 26 (2), 164-167, 2008
Improved recovery of proteome‐informative, protein N‐terminal peptides by combined fractional diagonal chromatography (COFRADIC)
A Staes, P Van Damme, K Helsens, H Demol, J Vandekerckhove, ...
Proteomics 8 (7), 1362-1370, 2008
Complementary positional proteomics for screening substrates of endo-and exoproteases
P Van Damme, A Staes, S Bronsoms, K Helsens, N Colaert, ...
nature methods 7 (7), 512-515, 2010
In vitro and in vivo protein-bound tyrosine nitration characterized by diagonal chromatography
B Ghesquiere, N Colaert, K Helsens, L Dejager, C Vanhaute, K Verleysen, ...
Molecular & Cellular Proteomics 8 (12), 2642-2652, 2009
compomics-utilities: an open-source Java library for computational proteomics
H Barsnes, M Vaudel, N Colaert, K Helsens, A Sickmann, FS Berven, ...
BMC bioinformatics 12 (1), 1-6, 2011
A la carte proteomics with an emphasis on gel‐free techniques
K Gevaert, P Van Damme, B Ghesquière, F Impens, L Martens, K Helsens, ...
Proteomics 7 (16), 2698-2718, 2007
ms_lims, a simple yet powerful open source laboratory information management system for MS‐driven proteomics
K Helsens, N Colaert, H Barsnes, T Muth, K Flikka, A Staes, E Timmerman, ...
Proteomics 10 (6), 1261-1264, 2010
TraML—a standard format for exchange of selected reaction monitoring transition lists
EW Deutsch, M Chambers, S Neumann, F Levander, PA Binz, J Shofstahl, ...
Molecular & Cellular Proteomics 11 (4), 2012
Proteome-wide substrate analysis indicates substrate exclusion as a mechanism to generate caspase-7 versus caspase-3 specificity
D Demon, P Van Damme, TV Berghe, A Deceuninck, J Van Durme, ...
Molecular & Cellular Proteomics 8 (12), 2700-2714, 2009
Bioinformatics Analysis of a Saccharomyces cerevisiae N-Terminal Proteome Provides Evidence of Alternative Translation Initiation and Post-Translational N …
K Helsens, P Van Damme, S Degroeve, L Martens, T Arnesen, ...
Journal of proteome research 10 (8), 3578-3589, 2011
A quantitative proteomics design for systematic identification of protease cleavage events
F Impens, N Colaert, K Helsens, B Ghesquiere, E Timmerman, ...
Molecular & Cellular Proteomics 9 (10), 2327-2333, 2010
MS‐driven protease substrate degradomics
F Impens, N Colaert, K Helsens, K Plasman, P Van Damme, ...
Proteomics 10 (6), 1284-1296, 2010
Analysis of the resolution limitations of peptide identification algorithms
N Colaert, S Degroeve, K Helsens, L Martens
Journal of proteome research 10 (12), 5555-5561, 2011
MascotDatfile: an open‐source library to fully parse and analyse MASCOT MS/MS search results
K Helsens, L Martens, J Vandekerckhove, K Gevaert
Proteomics 7 (3), 364-366, 2007
Peptizer, a tool for assessing false positive peptide identifications and manually validating selected results
K Helsens, E Timmerman, J Vandekerckhove, K Gevaert, L Martens
Molecular & Cellular Proteomics 7 (12), 2364-2372, 2008
thermo-msf-parser: An Open Source Java Library to Parse and Visualize Thermo Proteome Discoverer msf Files
N Colaert, H Barsnes, M Vaudel, K Helsens, E Timmerman, A Sickmann, ...
Journal of proteome research 10 (8), 3840-3843, 2011
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