| Inferring horizontal gene transfer M Ravenhall, N Škunca, F Lassalle, C Dessimoz PLoS computational biology 11 (5), e1004095, 2015 | 430* | 2015 |
| GC-content evolution in bacterial genomes: the biased gene conversion hypothesis expands F Lassalle, S Périan, T Bataillon, X Nesme, L Duret, V Daubin PLoS genetics 11 (2), e1004941, 2015 | 245 | 2015 |
| Minimal standards for the description of new genera and species of rhizobia and agrobacteria PM De Lajudie, M Andrews, J Ardley, B Eardly, E Jumas-Bilak, ... International journal of systematic and evolutionary microbiology 69 (7 …, 2019 | 188 | 2019 |
| Genomic Species Are Ecological Species as Revealed by Comparative Genomics in Agrobacterium tumefaciens F Lassalle, T Campillo, L Vial, J Baude, D Costechareyre, D Chapulliot, ... Genome Biology and Evolution 3, 762-781, 2011 | 133 | 2011 |
| Improving the estimation of genetic distances from Next-Generation Sequencing data FG Vieira, F Lassalle, TS Korneliussen, M Fumagalli Biological journal of the Linnean Society 117 (1), 139-149, 2016 | 130 | 2016 |
| Oral microbiomes from hunter‐gatherers and traditional farmers reveal shifts in commensal balance and pathogen load linked to diet F Lassalle, M Spagnoletti, M Fumagalli, L Shaw, M Dyble, C Walker, ... Molecular ecology 27 (1), 182-195, 2018 | 122 | 2018 |
| Life in an Arsenic-Containing Gold Mine: Genome and Physiology of the Autotrophic Arsenite-Oxidizing Bacterium Rhizobium sp. NT-26 J Andres, F Arsene-Ploetze, V Barbe, C Brochier-Armanet, ... Genome Biology and Evolution 5 (5), 934-953, 2013 | 88 | 2013 |
| Islands of linkage in an ocean of pervasive recombination reveals two-speed evolution of human cytomegalovirus genomes F Lassalle, DP Depledge, MB Reeves, AC Brown, MT Christiansen, ... Virus Evolution 2 (1), vew017, 2016 | 85* | 2016 |
| Taxonomy of Rhizobiaceae revisited: proposal of a new framework for genus delimitation N Kuzmanović, C Fagorzi, A Mengoni, F Lassalle, GC diCenzo bioRxiv, 2021.08. 02.454807, 2021 | 62 | 2021 |
| Diversity and evolution of surface polysaccharide synthesis loci in Enterobacteriales KE Holt, F Lassalle, KL Wyres, R Wick, RJ Mostowy The ISME Journal 14 (7), 1713-1730, 2020 | 61 | 2020 |
| Single acquisition of protelomerase gave rise to speciation of a large and diverse clade within the Agrobacterium/Rhizobium supercluster characterized by the presence of a … MH Ramírez-Bahena, L Vial, F Lassalle, B Diel, D Chapulliot, V Daubin, ... Molecular phylogenetics and evolution 73, 202-207, 2014 | 59 | 2014 |
| Ecological speciation in bacteria: reverse ecology approaches reveal the adaptive part of bacterial cladogenesis F Lassalle, D Muller, X Nesme Research in microbiology 166 (10), 729-741, 2015 | 48 | 2015 |
| Different evolutionary trends form the twilight zone of the bacterial pan-genome G Horesh, A Taylor-Brown, S McGimpsey, F Lassalle, J Corander, ... Microbial Genomics 7 (9), 000670, 2021 | 34 | 2021 |
| Two Novel Genomospecies in the Agrobacterium tumefaciens Species Complex Associated with Rose Crown Gall H Mafakheri, SM Taghavi, J Puławska, P de Lajudie, F Lassalle, ... Phytopathology 109 (11), 1859-1868, 2019 | 33 | 2019 |
| Ancestral Genome Estimation Reveals the History of Ecological Diversification in Agrobacterium F Lassalle, R Planel, S Penel, D Chapulliot, V Barbe, A Dubost, A Calteau, ... Genome biology and evolution 9 (12), 3413-3431, 2017 | 31 | 2017 |
| Comparative Genomics of Novel Agrobacterium G3 Strains Isolated From the International Space Station and Description of Agrobacterium tomkonis sp. nov. NK Singh, C Lavire, J Nesme, L Vial, X Nesme, CE Mason, F Lassalle, ... Frontiers in Microbiology 12, 765943, 2021 | 29 | 2021 |
| Coevolution of sites under immune selection shapes Epstein–Barr virus population structure F Wegner, F Lassalle, DP Depledge, F Balloux, J Breuer Molecular Biology and Evolution 36 (11), 2512-2521, 2019 | 23 | 2019 |
| Phylogenomics reveals the basis of adaptation of Pseudorhizobium species to extreme environments and supports a taxonomic revision of the genus F Lassalle, SMM Dastgheib, FJ Zhao, J Zhang, S Verbarg, A Frühling, ... Systematic and Applied Microbiology, 126165, 2020 | 22* | 2020 |
| Revisiting the taxonomy of Allorhizobium vitis (ie agrobacterium vitis) using genomics-emended description of All. vitis sensu stricto and description of Allorhizobium … N Kuzmanović, E Biondi, J Overmann, J Puławska, S Verbarg, K Smalla, ... bioRxiv, 2020.2012. 2019.423612, 2020 | 20* | 2020 |
| Phylogenetic distribution and evolutionary dynamics of nod and T3SS genes in the genus Bradyrhizobium A Teulet, D Gully, Z Rouy, A Camuel, R Koebnik, E Giraud, F Lassalle Microbial genomics 6 (9), e000407, 2020 | 20 | 2020 |
Xavier NesmeChercheur en Ecologie Microbienne, Université de LyonVerified email at inra.fr
