Murray Cox
Murray Cox
Professor of Computational Biology; Deputy Head of School; Co-Director of Te Pūnaha Matatini
Verified email at - Homepage
TitleCited byYear
SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data
MP Cox, DA Peterson, PJ Biggs
BMC Bioinformatics 11 (1), 485, 2010
Plant-symbiotic fungi as chemical engineers: multi-genome analysis of the Clavicipitaceae reveals dynamics of alkaloid loci
CL Schardl, CA Young, U Hesse, SG Amyotte, K Andreeva, PJ Calie, ...
PLoS Genetics 9 (2), e1003323, 2013
A recent bottleneck of Y chromosome diversity coincides with a global change in culture
M Karmin, L Saag, M Vicente, MAW Sayres, M Järve, UG Talas, S Rootsi, ...
Genome Research 25 (4), 459-466, 2015
Recombination-filtered genomic datasets by information maximization
AE Woerner, MP Cox, MF Hammer
Bioinformatics 23 (14), 1851-1853, 2007
Genomic analyses inform on migration events during the peopling of Eurasia
L Pagani, DJ Lawson, E Jagoda, A Mörseburg, A Eriksson, M Mitt, ...
Nature 538 (7624), 238, 2016
The genomes of the fungal plant pathogens Cladosporium fulvum and Dothistroma septosporum reveal adaptation to different hosts and lifestyles but also signatures of common ancestry
PJGM De Wit, A Van Der Burgt, B Ökmen, I Stergiopoulos, ...
PLoS Genetics 8 (11), e1003088, 2012
Farming and language in Island Southeast Asia: reframing Austronesian history
M Donohue, T Denham, P Bellwood, MP Cox, JS Lansing, W Mahdi, ...
Current Anthropology 51 (2), 223-256, 2010
Sex-biased evolutionary forces shape genomic patterns of human diversity
MF Hammer, FL Mendez, MP Cox, AE Woerner, JD Wall
PLoS genetics 4 (9), e1000202, 2008
Genomic insights into the peopling of the Southwest Pacific
P Skoglund, C Posth, K Sirak, M Spriggs, F Valentin, S Bedford, GR Clark, ...
Nature 538 (7626), 510, 2016
Major east–west division underlies Y chromosome stratification across Indonesia
TM Karafet, B Hallmark, MP Cox, H Sudoyo, S Downey, JS Lansing, ...
Molecular Biology and Evolution 27 (8), 1833-1844, 2010
Disruption of signaling in a fungal-grass symbiosis leads to pathogenesis
C Eaton, M Cox, B Ambrose, M Becker, U Hesse, C Schardl, B Scott
Plant Physiology 153, 1780-1794, 2010
What triggers grass endophytes to switch from mutualism to pathogenism?
CJ Eaton, MP Cox, B Scott
Plant Science 180 (2), 190-195, 2011
The ratio of human X chromosome to autosome diversity is positively correlated with genetic distance from genes
MF Hammer, AE Woerner, FL Mendez, JC Watkins, MP Cox, JD Wall
Nature Genetics 42 (10), 830-831, 2010
A novel DNA sequence database for analyzing human demographic history
JD Wall, MP Cox, FL Mendez, A Woerner, T Severson, MF Hammer
Genome Research 18 (8), 1354-1361, 2008
Coevolution of languages and genes on the island of Sumba, eastern Indonesia
JS Lansing, MP Cox, SS Downey, BM Gabler, B Hallmark, TM Karafet, ...
Proceedings of the National Academy of Sciences USA 104 (41), 16022-16026, 2007
The Indonesian archipelago: an ancient genetic highway linking Asia and the Pacific
MK Tumonggor, TM Karafet, B Hallmark, JS Lansing, H Sudoyo, ...
Journal of Human Genetics 58 (3), 165-173, 2013
Accuracy of molecular dating with the rho statistic: deviations from coalescent expectations under a range of demographic models
MP Cox
Human Biology 81 (5/6), 911-934, 2009
Fungal endophyte infection of ryegrass reprograms host metabolism and alters development
PY Dupont, CJ Eaton, JJ Wargent, S Fechtner, P Solomon, J Schmid, ...
New Phytologist 208 (4), 1227-1240, 2015
A small cohort of Island Southeast Asian women founded Madagascar
MP Cox, MG Nelson, MK Tumonggor, FX Ricaut, H Sudoyo
Proceedings of the Royal Society of London B: Biological Sciences 279, 2761-2768, 2012
Inferring human population sizes, divergence times and rates of gene flow from mitochondrial, X and Y chromosome resequencing data
D Garrigan, SB Kingan, MM Pilkington, JA Wilder, MP Cox, H Soodyall, ...
Genetics 177 (4), 2195-2207, 2007
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