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Han Fang
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Year
Linformer: Self-attention with linear complexity
S Wang, BZ Li, M Khabsa, H Fang, H Ma
arXiv preprint arXiv:2006.04768, 2020
15232020
Accurate detection of complex structural variations using single molecule sequencing
FJ Sedlazeck, P Rescheneder, M Smolka, H Fang, M Nattestad, ...
Nature Methods, 2017
13162017
GenomeScope: fast reference-free genome profiling from short reads
GW Vurture, FJ Sedlazeck, M Nattestad, CJ Underwood, H Fang, ...
Bioinformatics 33 (14), 2202-2204, 2017
13152017
Accurate de novo and transmitted indel detection in exome-capture data using microassembly
G Narzisi, JA O'rawe, I Iossifov, H Fang, Y Lee, Z Wang, Y Wu, GJ Lyon, ...
Nature methods 11 (10), 1033-1036, 2014
2392014
Reducing INDEL calling errors in whole genome and exome sequencing data
H Fang, Y Wu, G Narzisi, JA O’Rawe, LTJ Barrón, J Rosenbaum, ...
Genome Medicine 6 (10), 89, 2014
1982014
Entailment as few-shot learner
S Wang, H Fang, M Khabsa, H Mao, H Ma
arXiv preprint arXiv:2104.14690, 2021
1832021
Complex rearrangements and oncogene amplifications revealed by long-read DNA and RNA sequencing of a breast cancer cell line
M Nattestad, S Goodwin, K Ng, T Baslan, FJ Sedlazeck, P Rescheneder, ...
Genome research 28 (8), 1126-1135, 2018
1732018
Microestimates of wealth for all low-and middle-income countries
G Chi, H Fang, S Chatterjee, JE Blumenstock
Proceedings of the National Academy of Sciences 119 (3), e2113658119, 2022
1622022
TAF1 variants are associated with dysmorphic features, intellectual disability, and neurological manifestations
JA O’Rawe, Y Wu, MJ Dörfel, AF Rope, PYB Au, JS Parboosingh, S Moon, ...
The American Journal of Human Genetics 97 (6), 922-932, 2015
1342015
Indel variant analysis of short-read sequencing data with Scalpel
H Fang, EA Grabowska, K Arora, V Vacic, MC Zody, I Iossifov, JA ORawe, ...
Nature Protocols 12 (11), 2529–2548, 2016
1172016
Effective long-context scaling of foundation models
W Xiong, J Liu, I Molybog, H Zhang, P Bhargava, R Hou, L Martin, ...
arXiv preprint arXiv:2309.16039, 2023
752023
Scikit-ribo enables accurate estimation and robust modeling of translation dynamics at codon resolution
H Fang, YF Huang, A Radhakrishnan, A Siepel, GJ Lyon, MC Schatz
Cell systems 6 (2), 180-191. e4, 2018
452018
Self-attention with linear complexity. arXiv 2020
S Wang, BZ Li, M Khabsa, H Fang, HL Ma
arXiv preprint arXiv:2006.04768, 0
27
Whole genome sequencing of one complex pedigree illustrates challenges with genomic medicine
H Fang, Y Wu, H Yang, M Yoon, LT Jiménez-Barrón, D Mittelman, ...
BMC medical genomics 10, 1-16, 2017
202017
Integrating precision medicine in the study and clinical treatment of a severely mentally ill person
JA O’Rawe, H Fang, S Rynearson, R Robison, ES Kiruluta, G Higgins, ...
PeerJ 1, e177, 2013
202013
Bayesformer: Transformer with uncertainty estimation
KA Sankararaman, S Wang, H Fang
arXiv preprint arXiv:2206.00826, 2022
172022
Proteomic and genomic characterization of a yeast model for Ogden syndrome
MJ Dörfel, H Fang, J Crain, M Klingener, J Weiser, GJ Lyon
Yeast 34 (1), 19-37, 2017
172017
Linformer: self-attention with linear complexity (2020)
S Wang, BZ Li, M Khabsa, H Fang, H Ma
arXiv preprint arXiv:2006.04768, 2006
152006
Linformer: Self-attention with linear complexity. CoRR abs/2006.04768 (2020)
S Wang, BZ Li, M Khabsa, H Fang, H Ma
102006
Genome-wide variant analysis of simplex autism families with an integrative clinical-bioinformatics pipeline
LT Jiménez-Barrón, JA O'Rawe, Y Wu, M Yoon, H Fang, I Iossifov, ...
Molecular Case Studies 1 (1), a000422, 2015
92015
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