Integrated proteogenomic characterization of human high-grade serous ovarian cancer H Zhang, T Liu, Z Zhang, SH Payne, B Zhang, JE McDermott, JY Zhou, ... Cell 166 (3), 755-765, 2016 | 971 | 2016 |
Identification of proteins in human cytomegalovirus (HCMV) particles: the HCMV proteome SM Varnum, DN Streblow, ME Monroe, P Smith, KJ Auberry, ... Journal of virology 78 (20), 10960-10966, 2004 | 848 | 2004 |
Proteogenomic analysis of human colon cancer reveals new therapeutic opportunities S Vasaikar, C Huang, X Wang, VA Petyuk, SR Savage, B Wen, Y Dou, ... Cell 177 (4), 1035-1049. e19, 2019 | 637 | 2019 |
Proteogenomic characterization reveals therapeutic vulnerabilities in lung adenocarcinoma MA Gillette, S Satpathy, S Cao, SM Dhanasekaran, SV Vasaikar, K Krug, ... Cell 182 (1), 200-225. e35, 2020 | 546 | 2020 |
Integrated proteogenomic characterization of clear cell renal cell carcinoma DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ... Cell 179 (4), 964-983. e31, 2019 | 522 | 2019 |
Proteogenomic and metabolomic characterization of human glioblastoma LB Wang, A Karpova, MA Gritsenko, JE Kyle, S Cao, Y Li, D Rykunov, ... Cancer cell 39 (4), 509-528. e20, 2021 | 474 | 2021 |
Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels P Mertins, F Yang, T Liu, DR Mani, VA Petyuk, MA Gillette, KR Clauser, ... Molecular & cellular proteomics 13 (7), 1690-1704, 2014 | 415 | 2014 |
Proteogenomic landscape of breast cancer tumorigenesis and targeted therapy K Krug, EJ Jaehnig, S Satpathy, L Blumenberg, A Karpova, M Anurag, ... Cell 183 (5), 1436-1456. e31, 2020 | 379 | 2020 |
Proteogenomic characterization of endometrial carcinoma Y Dou, EA Kawaler, DC Zhou, MA Gritsenko, C Huang, L Blumenberg, ... Cell 180 (4), 729-748. e26, 2020 | 372 | 2020 |
Proteogenomic characterization of pancreatic ductal adenocarcinoma L Cao, C Huang, DC Zhou, Y Hu, TM Lih, SR Savage, K Krug, DJ Clark, ... Cell 184 (19), 5031-5052. e26, 2021 | 349 | 2021 |
Review, evaluation, and discussion of the challenges of missing value imputation for mass spectrometry-based label-free global proteomics BJM Webb-Robertson, HK Wiberg, MM Matzke, JN Brown, J Wang, ... Journal of proteome research 14 (5), 1993-2001, 2015 | 301 | 2015 |
Challenges in biomarker discovery: combining expert insights with statistical analysis of complex omics data JE McDermott, J Wang, H Mitchell, BJ Webb-Robertson, R Hafen, ... Expert opinion on medical diagnostics 7 (1), 37-51, 2013 | 260 | 2013 |
Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma C Huang, L Chen, SR Savage, RV Eguez, Y Dou, Y Li, ... Cancer cell 39 (3), 361-379. e16, 2021 | 256 | 2021 |
Functional calcium-sensing receptors in rat fibroblasts are required for activation of SRC kinase and mitogen-activated protein kinase in response to extracellular calcium SE McNeil, SA Hobson, V Nipper, KD Rodland Journal of Biological Chemistry 273 (2), 1114-1120, 1998 | 251 | 1998 |
A proteogenomic portrait of lung squamous cell carcinoma S Satpathy, K Krug, PMJ Beltran, SR Savage, F Petralia, C Kumar-Sinha, ... Cell 184 (16), 4348-4371. e40, 2021 | 245 | 2021 |
Integrated proteogenomic characterization across major histological types of pediatric brain cancer F Petralia, N Tignor, B Reva, M Koptyra, S Chowdhury, D Rykunov, A Krek, ... Cell 183 (7), 1962-1985. e31, 2020 | 245 | 2020 |
Advances in targeted proteomics and applications to biomedical research T Shi, E Song, S Nie, KD Rodland, T Liu, WJ Qian, RD Smith Proteomics 16 (15-16), 2160-2182, 2016 | 245 | 2016 |
Antibody-free, targeted mass-spectrometric approach for quantification of proteins at low picogram per milliliter levels in human plasma/serum T Shi, TL Fillmore, X Sun, R Zhao, AA Schepmoes, M Hossain, F Xie, ... Proceedings of the National Academy of Sciences 109 (38), 15395-15400, 2012 | 234 | 2012 |
Recommendations for the generation, quantification, storage, and handling of peptides used for mass spectrometry–based assays AN Hoofnagle, JR Whiteaker, SA Carr, E Kuhn, T Liu, SA Massoni, ... Clinical chemistry 62 (1), 48-69, 2016 | 230 | 2016 |
Stimulation of phosphatidylinositol hydrolysis, diacylglycerol release, and gene expression in response to endothelin, a potent new agonist for fibroblasts and smooth muscle cells LL Muldoon, KD Rodland, ML Forsythe, BE Magun Journal of Biological Chemistry 264 (15), 8529-8536, 1989 | 204 | 1989 |