Emergence of genomic diversity and recurrent mutations in SARS-CoV-2 FB Lucy van Dorp, Mislav Acman, Damien Richard, Liam P. Shaw, Charlotte E ... Infection, Genetics and Evolution, 104351, 2020 | 938 | 2020 |
No evidence for increased transmissibility from recurrent mutations in SARS-CoV-2 L van Dorp, D Richard, CCS Tan, LP Shaw, M Acman, F Balloux Nature Communications 11 (1), 5986, 2020 | 377 | 2020 |
Pre-existing polymerase-specific T cells expand in abortive seronegative SARS-CoV-2 L Swadling, MO Diniz, NM Schmidt, OE Amin, A Chandran, E Shaw, ... Nature 601 (7891), 110-117, 2022 | 364 | 2022 |
Transmission of SARS-CoV-2 from humans to animals and potential host adaptation CCS Tan, SD Lam, D Richard, C Owen, D Berchtold, C Orengo, MS Nair, ... Nature Communications 13, 2988, 2022 | 118 | 2022 |
Treatment with low-concentration acidic electrolysed water combined with mild heat to sanitise fresh organic broccoli (Brassica oleracea) Q Liu, CCS Tan, Tan, H Yang, S Wang LWT-Food Science and Technology 79, 594-600, 2017 | 90 | 2017 |
No evidence for a common blood microbiome based on a population study of 9,770 healthy humans CCS Tan, KKK Ko, H Chen, J Liu, M Loh, SG10K_Health Consortium, ... Nature Microbiology 8 (5), 973-985, 2023 | 67 | 2023 |
Recurrent mutations in SARS-CoV-2 genomes isolated from mink point to rapid host-adaptation L van Dorp, CCS Tan, SD Lam, D Richard, C Owen, D Berchtold, ... BioRxiv, 2020.11. 16.384743, 2020 | 58 | 2020 |
Pre-existing T cell-mediated cross-reactivity to SARS-CoV-2 cannot solely be explained by prior exposure to endemic human coronaviruses CCS Tan, CJ Owen, CYL Tham, A Bertoletti, L van Dorp, F Balloux Infection, Genetics and Evolution 95 (105075), 2021 | 49 | 2021 |
The past, current and future epidemiological dynamic of SARS-CoV-2 F Balloux, C Tan, L Swadling, D Richard, C Jenner, M Maini, L van Dorp Oxford Open Immunology 3 (1), iqac003, 2022 | 33 | 2022 |
Genomic screening of 16 UK native bat species through conservationist networks uncovers coronaviruses with zoonotic potential CCS Tan, J Trew, TP Peacock, KY Mok, C Hart, K Lau, D Ni, CDL Orme, ... Nature Communications 14 (1), 3322, 2023 | 15 | 2023 |
A phylogeny-based metric for estimating changes in transmissibility from recurrent mutations in SARS-CoV-2 D Richard, LP Shaw, R Lanfear, R Corbett-Detig, A Hinrichs, J McBroome, ... BioRxiv, 2021.05. 06.442903, 2021 | 15 | 2021 |
The evolutionary drivers and correlates of viral host jumps CCS Tan, L van Dorp, F Balloux Nature Ecology & Evolution 8 (5), 960-971, 2024 | 14 | 2024 |
A novel method for the capture-based purification of whole viral native RNA genomes CCS Tan, S Maurer-Stroh, Y Wan, OM Sessions, PF de Sessions AMB Express 9, 1-9, 2019 | 13 | 2019 |
Detection of a historic reservoir of bedaquiline/clofazimine resistance-associated variants in Mycobacterium tuberculosis C Nimmo, AT Ortiz, CCS Tan, J Pang, M Acman, J Millard, N Padayatchi, ... Genome Medicine 16 (1), 34, 2024 | 9* | 2024 |
Coordinated surveillance is essential to monitor and mitigate the evolutionary impacts of SARS-CoV-2 spillover and circulation in animal hosts SV Kuchipudi, C Tan, L van Dorp, M Lichtveld, B Pickering, J Bowman, ... Nature Ecology & Evolution 7 (7), 956-959, 2023 | 9 | 2023 |
Metagenomic evidence for a polymicrobial signature of sepsis CCS Tan, M Acman, L van Dorp, F Balloux Microbial Genomics 7 (9), 000642, 2021 | 9 | 2021 |
Large clones of pre-existing T cells drive early immunity against SARS-COV-2 and LCMV infection M Milighetti, Y Peng, C Tan, M Mark, G Nageswaran, S Byrne, T Ronel, ... Iscience 26 (6), 2023 | 7 | 2023 |
A systematic review and meta-analysis of the risk of hepatitis B virus (HBV) resistance in people treated with entecavir or tenofovir SF Lumley, M Delphin, JF Mokaya, CCS Tan, E Martyn, M Anderson, ... Journal of Clinical Virology, 105711, 2024 | 1* | 2024 |
Early evolution of the BA. 2.86 variant sheds light on the origins of highly divergent SARS-CoV-2 lineages M Escalera Zamudio, C Tan, L van Dorp, F Balloux bioRxiv, 2024.07. 18.604213, 2024 | 1 | 2024 |
Corrigendum to A systematic review and meta-analysis of the risk of hepatitis B virus (HBV) resistance in people treated with entecavir or tenofovir.: Journal of Clinical … SF Lumley, M Delphin, J Mokaya, CCS Tan, E Martyn, M Anderson, KC Li, ... Journal of Clinical Virology 174, 105716, 2024 | | 2024 |