Dan Tulpan, Associate Professor

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Serge LegerNational Research CouncilVerified email at nrc.gc.ca
Mohsen Yoosefzadeh NajafabadiAssistant ProfessorVerified email at uoguelph.ca
Milad EskandariAssociate Professor - Plant Breeding and GeneticsVerified email at uoguelph.ca
Christine F BaesUniversity of Guelph, University of Bern, CGIL, ABScBG,Verified email at uoguelph.ca
Jennifer Lynn Ellis, Assistant ProfessorAnimal BioSciences Department, University of GuelphVerified email at uoguelph.ca
Flavio Schramm SchenkelProfessor, CGIL, Animal Biosciences, University of Guelph, ABScBG, FACVerified email at uoguelph.ca
Holger HoosRWTH Aachen University, Germany • Leiden University, Netherlands • University of British ColumbiaVerified email at cs.rwth-aachen.de
Filippo MigliorAdjunct Professor, University of Guelph, CGIL, ABScBG, FacVerified email at uoguelph.ca
Paola LeccaAssistant Professor, Faculty of Engineering - Free University of Bozen-Bolzano, ItalyVerified email at unibz.it
Miroslava Cuperlovic-CulfNational Research Council of CanadaVerified email at nrc.ca
Anne CondonProfessor of Computer Science, University of British ColumbiaVerified email at cs.ubc.ca
Fiona BrinkmanSimon Fraser UniversityVerified email at sfu.ca
Jennifer GardyBill & Melinda Gates FoundationVerified email at gatesfoundation.org
Tamara MunznerProfessor of Computer Science, University of British ColumbiaVerified email at cs.ubc.ca
Robert E. W. HancockUniversity of British ColumbiaVerified email at hancocklab.com
David J LynnSAHMRI and Flinders UniversityVerified email at sahmri.com
Geoff WinsorLead Database Developer, BioinformaticsVerified email at sfu.ca
Matthew R. LairdSenior Developer, BioinformaticsVerified email at sfu.ca
Karsten HokampBioinformatics Research Officer, Smurfit Institute of Genetics, Trinity College DublinVerified email at tcd.ie
Naisha ShahAssociate ProfessorVerified email at jcvi.org

Dan Tulpan, Associate Professor

Department of Animal Biosciences, University of Guelph, ABScBG, FAC, CGIL

Verified email at uoguelph.ca - Homepage

bioinformatics computational biology genomics computer science algorithms


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InnateDB: facilitating systems-level analyses of the mammalian innate immune response DJ Lynn, GL Winsor, C Chan, N Richard, MR Laird, A Barsky, JL Gardy, ... Molecular Systems Biology 4 (1), 2008	422	2008
Application of machine learning algorithms in plant breeding: predicting yield from hyperspectral reflectance in soybean M Yoosefzadeh-Najafabadi, HJ Earl, D Tulpan, J Sulik, M Eskandari Frontiers in plant science 11, 1-14, 2021	163	2021
Stochastic local search algorithms for DNA word design DC Tulpan, HH Hoos, AE Condon DNA Computing: 8th International Workshop on DNA-Based Computers, DNA8 …, 2003	135	2003
MetaboHunter: an automatic approach for identification of metabolites from 1H-NMR spectra of complex mixtures D Tulpan, S Leger, L Belliveau, A Culf, M Cuperlovic-Culf BMC Bioinformatics 12 (1), 400, 2011	132	2011
Thermodynamically based DNA strand design D Tulpan, M Andronescu, SB Chang, MR Shortreed, A Condon, HH Hoos, ... Nucleic Acids Research 33 (15), 4951, 2005	79	2005
Synergy between mechanistic modelling and data-driven models for modern animal production systems in the era of big data JL Ellis, M Jacobs, J Dijkstra, H Van Laar, JP Cant, D Tulpan, N Ferguson Animal 14 (S2), s223-s237, 2020	71	2020
Hybrid randomised neighbourhoods improve stochastic local search for DNA code design DC Tulpan, HH Hoos Advances in Artificial Intelligence: 16th Conference of the Canadian Society …, 2003	65	2003
ASAS-NANP SYMPOSIUM: Applications of machine learning for livestock body weight prediction from digital images Z Wang, S Shadpour, E Chan, V Rotondo, KM Wood, D Tulpan Journal of Animal Science 99 (2), skab022, 2021	63	2021
A review of traditional and machine learning methods applied to animal breeding S Nayeri, M Sargolzaei, D Tulpan Animal health research reviews 20 (1), 31-46, 2019	61	2019
Using hybrid artificial intelligence and evolutionary optimization algorithms for estimating soybean yield and fresh biomass using hyperspectral vegetation indices M Yoosefzadeh-Najafabadi, D Tulpan, M Eskandari Remote Sensing 13 (13), 2555, 2021	58	2021
Analysis of MAPK and MAPKK gene families in wheat and related Triticeae species RK Goyal, D Tulpan, N Chomistek, D González-Peña Fundora, C West, ... BMC genomics 19, 1-26, 2018	56	2018
Exogenous Abscisic Acid and Gibberellic Acid Elicit Opposing Effects on Fusarium graminearum Infection in Wheat LM Buhrow, D Cram, D Tulpan, NA Foroud, MC Loewen Phytopathology 106 (9), 986-996, 2016	55	2016
Free energy estimation of short DNA duplex hybridizations D Tulpan, M Andronescu, S Leger BMC Bioinformatics 11 (1), 105, 2010	54	2010
A thermodynamic approach to designing structure-free combinatorial DNA word sets MR Shortreed, SB Chang, DG Hong, M Phillips, B Campion, DC Tulpan, ... Nucleic Acids Research 33 (15), 4965, 2005	50	2005
Application of machine learning and genetic optimization algorithms for modeling and optimizing soybean yield using its component traits M Yoosefzadeh-Najafabadi, D Tulpan, M Eskandari Plos one 16 (4), e0250665, 2021	49	2021
In pursuit of a better broiler: growth, efficiency, and mortality of 16 strains of broiler chickens S Torrey, M Mohammadigheisar, MN Dos Santos, D Rothschild, ... Poultry Science 100 (3), 100955, 2021	45	2021
Non-intrusive patient monitoring of Alzheimer's disease subjects using wireless sensor networks M Avvenuti, C Baker, J Light, D Tulpan, A Vecchio 2009 World Congress on Privacy, Security, Trust and the Management of e …, 2009	43	2009
Genome-wide association studies of soybean yield-related hyperspectral reflectance bands using machine learning-mediated data integration methods M Yoosefzadeh-Najafabadi, S Torabi, D Tulpan, I Rajcan, M Eskandari Frontiers in plant science 12, 777028, 2021	37	2021
Machine-learning-based genome-wide association studies for uncovering QTL underlying soybean yield and its components M Yoosefzadeh-Najafabadi, M Eskandari, S Torabi, D Torkamaneh, ... International Journal of Molecular Sciences 23 (10), 5538, 2022	35	2022
Thermodynamic post-processing versus GC-content pre-processing for DNA codes satisfying the Hamming distance and reverse-complement constraints D Tulpan, DH Smith, R Montemanni IEEE/ACM Transactions on Computational Biology and Bioinformatics 11 (2 …, 2014	29	2014

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