| Brain tumor classification for MR images using transfer learning and fine-tuning ZNK Swati, Q Zhao, M Kabir, F Ali, Z Ali, S Ahmed, J Lu Computerized Medical Imaging and Graphics 75, 34-46, 2019 | 592 | 2019 |
| Content-based brain tumor retrieval for MR images using transfer learning ZNK Swati, Q Zhao, M Kabir, F Ali, Z Ali, S Ahmed, J Lu IEEE Access 7, 17809-17822, 2019 | 191 | 2019 |
| Identification of Heat Shock Protein families and J-protein types by incorporating Dipeptide Composition into Chou's general PseAAC S Ahmad, M Kabir, M Hayat Computer methods and programs in biomedicine 122 (2), 165-174, 2015 | 110 | 2015 |
| iNR-2L: A two-level sequence-based predictor developed via Chou's 5-steps rule and general PseAAC for identifying nuclear receptors and their families M Kabir, S Ahmad, M Iqbal, M Hayat Genomics 112 (1), 276-285, 2020 | 70 | 2020 |
| DP-BINDER: machine learning model for prediction of DNA-binding proteins by fusing evolutionary and physicochemical information F Ali, S Ahmed, ZNK Swati, S Akbar Journal of Computer-Aided Molecular Design 33, 645-658, 2019 | 65 | 2019 |
| TargetCPP: accurate prediction of cell-penetrating peptides from optimized multi-scale features using gradient boost decision tree M Arif, S Ahmad, F Ali, G Fang, M Li, DJ Yu Journal of computer-aided molecular design 34, 841-856, 2020 | 54 | 2020 |
| iDTi-CSsmoteB: identification of drug–target interaction based on drug chemical structure and protein sequence using XGBoost with over-sampling technique SMOTE SMH Mahmud, W Chen, H Jahan, Y Liu, NI Sujan, S Ahmed IEEE Access 7, 48699-48714, 2019 | 53 | 2019 |
| Intelligent computational method for discrimination of anticancer peptides by incorporating sequential and evolutionary profiles information M Kabir, M Arif, S Ahmad, Z Ali, ZNK Swati, DJ Yu Chemometrics and Intelligent Laboratory Systems 182, 158-165, 2018 | 50 | 2018 |
| Pred-BVP-Unb: Fast prediction of bacteriophage Virion proteins using un-biased multi-perspective properties with recursive feature elimination M Arif, F Ali, S Ahmad, M Kabir, Z Ali, M Hayat Genomics 112 (2), 1565-1574, 2020 | 46 | 2020 |
| SDBP-Pred: Prediction of single-stranded and double-stranded DNA-binding proteins by extending consensus sequence and K-segmentation strategies into PSSM F Ali, M Arif, ZU Khan, M Kabir, S Ahmed, DJ Yu Analytical biochemistry 589, 113494, 2020 | 35 | 2020 |
| StackACPred: Prediction of anticancer peptides by integrating optimized multiple feature descriptors with stacked ensemble approach M Arif, S Ahmed, F Ge, M Kabir, YD Khan, DJ Yu, M Thafar Chemometrics and Intelligent Laboratory Systems 220, 104458, 2022 | 33 | 2022 |
| iTIS-PseKNC: Identification of Translation Initiation Site in human genes using pseudo k-tuple nucleotides composition M Kabir, M Iqbal, S Ahmad, M Hayat Computers in biology and medicine 66, 252-257, 2015 | 32 | 2015 |
| AMYPred-FRL is a novel approach for accurate prediction of amyloid proteins by using feature representation learning P Charoenkwan, S Ahmed, C Nantasenamat, JMW Quinn, MA Moni, ... Scientific reports 12 (1), 7697, 2022 | 31 | 2022 |
| DeepPPSite: a deep learning-based model for analysis and prediction of phosphorylation sites using efficient sequence information S Ahmed, M Kabir, M Arif, ZU Khan, DJ Yu Analytical biochemistry 612, 113955, 2021 | 29 | 2021 |
| Improving prediction of extracellular matrix proteins using evolutionary information via a grey system model and asymmetric under-sampling technique M Kabir, S Ahmad, M Iqbal, ZNK Swati, Z Liu, DJ Yu Chemometrics and Intelligent Laboratory Systems 174, 22-32, 2018 | 26 | 2018 |
| SCORPION is a stacking-based ensemble learning framework for accurate prediction of phage virion proteins S Ahmad, P Charoenkwan, JMW Quinn, MA Moni, MM Hasan, P Lio’, ... Scientific reports 12 (1), 4106, 2022 | 25 | 2022 |
| Prediction of membrane protein types by exploring local discriminative information from evolutionary profiles M Kabir, M Arif, F Ali, S Ahmad, ZNK Swati, DJ Yu Analytical biochemistry 564, 123-132, 2019 | 24 | 2019 |
| An Integrated Feature Selection Algorithm for Cancer Classification using Gene Expression Data S Ahmed, M Kabir, Z Ali, M Arif, F Ali, DJ Yu Combinatorial Chemistry & High Throughput Screening 21 (9), pp. 645(15), 2018 | 23 | 2018 |
| Improving secretory proteins prediction in Mycobacterium tuberculosis using the unbiased dipeptide composition with support vector machine S Ahmed, M Kabir, M Arif, Z Ali, F Ali, ZNK Swati International Journal of Data Mining and Bioinformatics 21 (3), 212-229, 2018 | 19 | 2018 |
| Bi-PSSM: Position specific scoring matrix based intelligent computational model for identification of mycobacterial membrane proteins M Khan, M Hayat, SA Khan, S Ahmad, N Iqbal Journal of Theoretical Biology 435, 116-124, 2017 | 19 | 2017 |
Muhammad KabirPostdoctoral researcher at BMC, Lund University, SwedenVerified email at med.lu.se
