Stephen W. Schaeffer
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Evolution of genes and genomes on the Drosophila phylogeny
AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ...
Nature 450 (7167), 203-18, 2007
Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution
S Richards, Y Liu, BR Bettencourt, P Hradecky, S Letovsky, R Nielsen, ...
Genome research 15 (1), 1-18, 2005
Polytene chromosomal maps of 11 Drosophila species: the order of genomic scaffolds inferred from genetic and physical maps
SW Schaeffer, A Bhutkar, BF McAllister, M Matsuda, LM Matzkin, ...
Genetics 179 (3), 1601-1655, 2008
Chromosomal rearrangement inferred from comparisons of 12 Drosophila genomes
A Bhutkar, SW Schaeffer, SM Russo, M Xu, TF Smith, WM Gelbart
Genetics 179 (3), 1657-1680, 2008
Natural selection and the frequency distributions of “silent” DNA polymorphism in Drosophila
H Akashi, SW Schaeffer
Genetics 146 (1), 295-307, 1997
Evolutionary genomics of inversions in Drosophila pseudoobscura: evidence for epistasis
SW Schaeffer, MP Goetting-Minesky, M Kovacevic, JR Peoples, ...
Proceedings of the National Academy of Sciences 100 (14), 8319-8324, 2003
Review article phylogeny and biogeography of deep sea vestimentiferan tubeworms and their bacterial symbionts
ER Mcmullin, S Hourdez, SW Schaeffer, CR Fisher
Symbiosis, 2003
Divergence Between the Drosophila pseudoobscura and D. persimilis Genome Sequences in Relation to Chromosomal Inversions
MAF Noor, DA Garfield, SW Schaeffer, CA Machado
Genetics 177 (3), 1417-1428, 2007
S-allele sequence diversity in natural populations of Solanum carolinense (Horsenettle)
AD Richman, TH Kao, SW Schaeffer, MK Uyenoyama
Heredity 75 (4), 405-415, 1995
Estimates of linkage disequilibrium and the recombination parameter determined from segregating nucleotide sites in the alcohol dehydrogenase region of Drosophila pseudoobscura.
SW Schaeffer, EL Miller
Genetics 135 (2), 541-552, 1993
Tubeworm succession at hydrothermal vents: use of biogenic cues to reduce habitat selection error?
LS Mullineaux, CR Fisher, CH Peterson, SW Schaeffer
Oecologia 123, 275-284, 2000
Molecular evolution of inversions in Drosophila pseudoobscura: the amylase gene region.
CF Aquadro, AL Weaver, SW Schaeffer, WW Anderson
Proceedings of the National Academy of Sciences 88 (1), 305-309, 1991
Nucleotide Sequence of the Adh Gene Region of Drosophila pseudoobscura: Evolutionary Change and Evidence for an Ancient Gene Duplication
SW Schaeffer, CF Aquadro
Genetics 117 (1), 61-73, 1987
Sulfide binding is mediated by zinc ions discovered in the crystal structure of a hydrothermal vent tubeworm hemoglobin
JF Flores, CR Fisher, SL Carney, BN Green, JK Freytag, SW Schaeffer, ...
Proceedings of the National Academy of Sciences 102 (8), 2713-2718, 2005
Mechanisms of Genetic Exchange Within the Chromosomal Inversions of Drosophila pseudoobscura
SW Schaeffer, WW Anderson
Genetics 171 (4), 1729-1739, 2005
Molecular population genetics of sequence length diversity in the Adh region of Drosophila pseudoobscura
SW Schaeffer
Genetics Research 80 (3), 163-175, 2002
Ancestral polymorphisms explain the role of chromosomal inversions in speciation
ZL Fuller, CJ Leonard, RE Young, SW Schaeffer, N Phadnis
PLoS genetics 14 (7), e1007526, 2018
Broad geographic sampling reveals the shared basis and environmental correlates of seasonal adaptation in Drosophila
HE Machado, AO Bergland, R Taylor, S Tilk, E Behrman, K Dyer, ...
Elife 10, e67577, 2021
Nucleotide sequence analysis of Adh genes estimates the time of geographic isolation of the Bogota population of Drosophila pseudoobscura.
SW Schaeffer, EL Miller
Proceedings of the National Academy of Sciences 88 (14), 6097-6101, 1991
Estimates of gene flow in Drosophila pseudoobscura determined from nucleotide sequence analysis of the alcohol dehydrogenase region.
SW Schaeffer, EL Miller
Genetics 132 (2), 471-480, 1992
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