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Simon J. Larsen
Simon J. Larsen
Esoft
Verified email at energinet.dk
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Cited by
Year
From single drug targets to synergistic network pharmacology in ischemic stroke
AI Casas, AA Hassan, SJ Larsen, V Gomez-Rangel, M Elbatreek, ...
Proceedings of the National Academy of Sciences 116 (14), 7129-7136, 2019
1592019
DeepCLIP: predicting the effect of mutations on protein–RNA binding with deep learning
AGB Grønning, TK Doktor, SJ Larsen, USS Petersen, LL Holm, GH Bruun, ...
Nucleic acids research 48 (13), 7099-7118, 2020
742020
E. coli gene regulatory networks are inconsistent with gene expression data
SJ Larsen, R Röttger, HHHW Schmidt, J Baumbach
Nucleic acids research 47 (1), 85-92, 2018
382018
Genomic profiling in ovarian cancer retreated with platinum based chemotherapy presented homologous recombination deficiency and copy number imbalances of CCNE1 and RB1 genes
AABA da Costa, LM do Canto, SJ Larsen, ARG Ribeiro, CE Stecca, ...
BMC cancer 19 (1), 422, 2019
312019
CoNVaQ: a web tool for copy number variation-based association studies
SJ Larsen, LM do Canto, SR Rogatto, J Baumbach
BMC genomics 19 (1), 369, 2018
232018
Increased levels of genomic instability and mutations in homologous recombination genes in locally advanced rectal carcinomas
LM Canto, SJ Larsen, BE Catin Kupper, MDFS Begnami, ...
Frontiers in oncology 9, 395, 2019
222019
Comprehensive Genomic Profiling of Androgen-Receptor-Negative Canine Prostate Cancer
R Laufer-Amorim, CE Fonseca-Alves, RAR Villacis, SAD Linde, C Marcio, ...
International Journal of Molecular Sciences 20 (7), 1555, 2019
212019
Inflammatory Breast Cancer: Clinical Implications of Genomic Alterations and Mutational Profiling
FLC Faldoni, RAR Villacis, LM Canto, CE Fonseca-Alves, SS Cury, ...
Cancers 12 (10), 2816, 2020
182020
The Selection of a Hepatocyte Cell Line Susceptible to Plasmodium falciparum Sporozoite Invasion That Is Associated With Expression of Glypican-3
RE Tweedell, D Tao, T Hamerly, TM Robinson, S Larsen, AGB Grønning, ...
Frontiers in microbiology 10, 127, 2019
182019
De Novo and Supervised Endophenotyping Using Network-Guided Ensemble Learning
SJ Larsen, HHHW Schmidt, J Baumbach
Systems Medicine 3 (1), 8-21, 2020
152020
A simulated annealing algorithm for maximum common edge subgraph detection in biological networks
SJ Larsen, FG Alkærsig, HJ Ditzel, I Jurisica, N Alcaraz, J Baumbach
Proceedings of the Genetic and Evolutionary Computation Conference 2016, 341-348, 2016
102016
CytoMCS: a multiple maximum common subgraph detection tool for Cytoscape
SJ Larsen, J Baumbach
Journal of integrative bioinformatics 14 (2), 2017
82017
Hierarchical association of COPD to principal genetic components of biological systems
DE Carlin, SJ Larsen, V Sirupurapu, MH Cho, EK Silverman, J Baumbach, ...
Plos one 18 (5), e0286064, 2023
2023
Finding patterns in complex biomedical data using networks and molecular profiling
SJ Larsen
University of Southern Denmark, Faculty of Science, 2019
2019
Mutational profile and genomic instability according to response to therapy in rectal carcinomas
LM do Canto, SJ Larsen, BEC Kupper, MDF de Souza Begnami, CS Neto, ...
Cancer Research 78 (13 Supplement), 5360-5360, 2018
2018
Using neural networks to predict effects of mutations on protein binding
AGB Gronning, TK Doktor, SJ Larsen, GH Bruun, J Baumbach, ...
50th European Human Genetics Conference 26, 363-364, 2018
2018
EASyM Europe 2018 Utrecht Conference Big Data-Transition to Practice 7th–9th November 2018 Utrecht, Netherlands Abstracts
PJ Sterk, J Baumbach, M Moškon, T Cvitanović Tomaš, M Mraz, ...
Systems Medicine 2 (1), A-1-A-18, 0
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