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Tujin Shi
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Advancing the sensitivity of selected reaction monitoring‐based targeted quantitative proteomics
T Shi, D Su, T Liu, K Tang, DG Camp, WJ Qian, RD Smith
Proteomics 12 (8), 1074-1092, 2012
2562012
Advances in targeted proteomics and applications to biomedical research
T Shi, E Song, S Nie, KD Rodland, T Liu, WJ Qian, RD Smith
Proteomics 16 (15-16), 2160-2182, 2016
2342016
Antibody-free, targeted mass-spectrometric approach for quantification of proteins at low picogram per milliliter levels in human plasma/serum
T Shi, TL Fillmore, X Sun, R Zhao, AA Schepmoes, M Hossain, F Xie, ...
Proceedings of the National Academy of Sciences 109 (38), 15395-15400, 2012
2312012
Recommendations for the generation, quantification, storage, and handling of peptides used for mass spectrometry–based assays
AN Hoofnagle, JR Whiteaker, SA Carr, E Kuhn, T Liu, SA Massoni, ...
Clinical chemistry 62 (1), 48-69, 2016
2202016
Free 25-hydroxyvitamin D: impact of vitamin D binding protein assays on racial-genotypic associations
CM Nielson, KS Jones, RF Chun, JM Jacobs, Y Wang, M Hewison, ...
The Journal of Clinical Endocrinology & Metabolism 101 (5), 2226-2234, 2016
1752016
High-throughput single cell proteomics enabled by multiplex isobaric labeling in a nanodroplet sample preparation platform
M Dou, G Clair, CF Tsai, K Xu, WB Chrisler, RL Sontag, R Zhao, RJ Moore, ...
Analytical chemistry 91 (20), 13119-13127, 2019
1712019
Conservation of protein abundance patterns reveals the regulatory architecture of the EGFR-MAPK pathway
T Shi, M Niepel, JE McDermott, Y Gao, CD Nicora, WB Chrisler, ...
Science Signaling 9 (436), rs6-rs6, 2016
1412016
Interactome Analyses Identify Ties of PrPC and Its Mammalian Paralogs to Oligomannosidic N-Glycans and Endoplasmic Reticulum-Derived Chaperones
JC Watts, H Huo, Y Bai, S Ehsani, AH Won, T Shi, N Daude, A Lau, ...
PLoS pathogens 5 (10), e1000608, 2009
1412009
An improved boosting to amplify signal with isobaric labeling (iBASIL) strategy for precise quantitative single-cell proteomics
CF Tsai, R Zhao, SM Williams, RJ Moore, K Schultz, WB Chrisler, ...
Molecular & Cellular Proteomics 19 (5), 828-838, 2020
1392020
Circulating ACE2-expressing extracellular vesicles block broad strains of SARS-CoV-2
L El-Shennawy, AD Hoffmann, NK Dashzeveg, KM McAndrews, PJ Mehl, ...
Nature Communications 13 (1), 405, 2022
1272022
Role of assay type in determining free 25-hydroxyvitamin D levels in diverse populations
CM Nielson, KS Jones, RF Chun, J Jacobs, Y Wang, M Hewison, ...
New England Journal of Medicine 374 (17), 1695-1696, 2016
1032016
Targeted brain proteomics uncover multiple pathways to Alzheimer's dementia
L Yu, VA Petyuk, C Gaiteri, S Mostafavi, T Young‐Pearse, RC Shah, ...
Annals of neurology 84 (1), 78-88, 2018
1022018
Simple sodium dodecyl sulfate-assisted sample preparation method for LC-MS-based proteomics applications
JY Zhou, GP Dann, T Shi, L Wang, X Gao, D Su, CD Nicora, AK Shukla, ...
Analytical chemistry 84 (6), 2862-2867, 2012
1012012
Boosting to amplify signal with isobaric labeling (BASIL) strategy for comprehensive quantitative phosphoproteomic characterization of small populations of cells
L Yi, CF Tsai, E Dirice, AC Swensen, J Chen, T Shi, MA Gritsenko, ...
Analytical chemistry 91 (9), 5794-5801, 2019
922019
Mining the human urine proteome for monitoring renal transplant injury
TK Sigdel, Y Gao, J He, A Wang, CD Nicora, TL Fillmore, T Shi, ...
Kidney international 89 (6), 1244-1252, 2016
922016
Receptor-driven ERK pulses reconfigure MAPK signaling and enable persistence of drug-adapted BRAF-mutant melanoma cells
L Gerosa, C Chidley, F Fröhlich, G Sanchez, SK Lim, J Muhlich, JY Chen, ...
Cell systems 11 (5), 478-494. e9, 2020
912020
Targeted quantification of low ng/mL level proteins in human serum without immunoaffinity depletion
T Shi, X Sun, Y Gao, TL Fillmore, AA Schepmoes, R Zhao, J He, RJ Moore, ...
Journal of proteome research 12 (7), 3353-3361, 2013
872013
The AML microenvironment catalyzes a stepwise evolution to gilteritinib resistance
SK Joshi, T Nechiporuk, D Bottomly, PD Piehowski, JA Reisz, ...
Cancer cell 39 (7), 999-1014. e8, 2021
802021
IgY14 and SuperMix immunoaffinity separations coupled with liquid chromatography–mass spectrometry for human plasma proteomics biomarker discovery
T Shi, JY Zhou, MA Gritsenko, M Hossain, DG Camp II, RD Smith, ...
Methods 56 (2), 246-253, 2012
782012
A highly sensitive targeted mass spectrometric assay for quantification of AGR2 protein in human urine and serum
T Shi, Y Gao, SI Quek, TL Fillmore, CD Nicora, D Su, R Zhao, J Kagan, ...
Journal of proteome research 13 (2), 875-882, 2014
722014
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Articles 1–20