Obg and membrane depolarization are part of a microbial bet-hedging strategy that leads to antibiotic tolerance N Verstraeten, WJ Knapen, CI Kint, V Liebens, B Van den Bergh, ... Molecular cell 59 (1), 9-21, 2015 | 304 | 2015 |
Targeting the 16s rRNA gene for bacterial identification in complex mixed samples: Comparative evaluation of second (illumina) and third (oxford nanopore technologies … R Winand, B Bogaerts, S Hoffman, L Lefevre, M Delvoye, J Van Braekel, ... International journal of molecular sciences 21 (1), 298, 2019 | 175 | 2019 |
Validation of a bioinformatics workflow for routine analysis of whole genome sequencing data and related challenges for pathogen typing in a European National Reference Center … B Bogaerts, R Winand, Q Fu, J Van Braekel, PJ Ceyssens, W Mattheus, ... Frontiers in microbiology 10, 362, 2019 | 51 | 2019 |
COLOMBOS v2. 0: an ever expanding collection of bacterial expression compendia P Meysman, P Sonego, L Bianco, Q Fu, D Ledezma-Tejeida, ... Nucleic acids research 42 (D1), D649-D653, 2013 | 45 | 2013 |
Expression divergence between Escherichia coli and Salmonella enterica serovar Typhimurium reflects their lifestyles P Meysman, A Sánchez-Rodríguez, Q Fu, K Marchal, K Engelen Molecular biology and evolution 30 (6), 1302-1314, 2013 | 37 | 2013 |
COLOMBOS: access port for cross-platform bacterial expression compendia K Engelen, Q Fu, P Meysman, A Sánchez-Rodríguez, R De Smet, ... PLoS One 6 (7), e20938, 2011 | 33 | 2011 |
Validation strategy of a bioinformatics whole genome sequencing workflow for Shiga toxin-producing Escherichia coli using a reference collection extensively characterized with … B Bogaerts, S Nouws, B Verhaegen, S Denayer, J Van Braekel, R Winand, ... Microbial genomics 7 (3), 2021 | 27 | 2021 |
ModuleDigger: an itemset mining framework for the detection of cis-regulatory modules H Sun, T De Bie, V Storms, Q Fu, T Dhollander, K Lemmens, A Verstuyf, ... BMC bioinformatics 10 (1), S30, 2009 | 15 | 2009 |
Whole-genome-based phylogenomic analysis of the Belgian 2016–2017 influenza A (H3N2) outbreak season allows improved surveillance LAE Van Poelvoorde, B Bogaerts, Q Fu, SCJ De Keersmaecker, I Thomas, ... Microbial genomics 7 (9), 2021 | 13 | 2021 |
Directed module detection in a large-scale expression compendium Q Fu, K Lemmens, A Sanchez-Rodriguez, IM Thijs, P Meysman, H Sun, ... Bacterial Molecular Networks: Methods and Protocols, 131-165, 2012 | 5 | 2012 |
Cross-platform expression compendia K Engelen, Q Fu, K Lemmens, R De Smet, T Van den Bulcke, AC Fierro, ... | | 2008 |