| Multiomics modeling of the immunome, transcriptome, microbiome, proteome and metabolome adaptations during human pregnancy MS Ghaemi, DB DiGiulio, K Contrepois, B Callahan, TTM Ngo, ... Bioinformatics 35 (1), 95-103, 2019 | 150 | 2019 |
| A proteomic clock of human pregnancy N Aghaeepour, B Lehallier, Q Baca, EA Ganio, RJ Wong, MS Ghaemi, ... American journal of obstetrics and gynecology 218 (3), 347. e1-347. e14, 2018 | 97 | 2018 |
| Integrated trajectories of the maternal metabolome, proteome, and immunome predict labor onset IA Stelzer, MS Ghaemi, X Han, K Ando, JJ Hédou, D Feyaerts, ... Science translational medicine 13 (592), eabd9898, 2021 | 91 | 2021 |
| Differential dynamics of the maternal immune system in healthy pregnancy and preeclampsia X Han, MS Ghaemi, K Ando, LS Peterson, EA Ganio, AS Tsai, ... Frontiers in immunology 10, 450842, 2019 | 78 | 2019 |
| A year-long immune profile of the systemic response in acute stroke survivors AS Tsai, K Berry, MM Beneyto, D Gaudilliere, EA Ganio, A Culos, ... Brain 142 (4), 978-991, 2019 | 64 | 2019 |
| Multiomics characterization of preterm birth in low-and middle-income countries F Jehan, S Sazawal, AH Baqui, MI Nisar, U Dhingra, R Khanam, M Ilyas, ... JAMA network open 3 (12), e2029655-e2029655, 2020 | 63 | 2020 |
| Integration of mechanistic immunological knowledge into a machine learning pipeline improves predictions A Culos, AS Tsai, N Stanley, M Becker, MS Ghaemi, DR McIlwain, ... Nature machine intelligence 2 (10), 619-628, 2020 | 53 | 2020 |
| Systemic immunologic consequences of chronic periodontitis DK Gaudilliere, A Culos, K Djebali, AS Tsai, EA Ganio, WM Choi, X Han, ... Journal of Dental Research 98 (9), 985-993, 2019 | 41 | 2019 |
| VoPo leverages cellular heterogeneity for predictive modeling of single-cell data N Stanley, IA Stelzer, AS Tsai, R Fallahzadeh, E Ganio, M Becker, ... Nature communications 11 (1), 3738, 2020 | 37 | 2020 |
| Single-cell peripheral immunoprofiling of Alzheimer’s and Parkinson’s diseases T Phongpreecha, R Fernandez, D Mrdjen, A Culos, CR Gajera, ... Science advances 6 (48), eabd5575, 2020 | 35 | 2020 |
| Preferential inhibition of adaptive immune system dynamics by glucocorticoids in patients after acute surgical trauma EA Ganio, N Stanley, V Lindberg-Larsen, J Einhaus, AS Tsai, F Verdonk, ... Nature communications 11 (1), 3737, 2020 | 30 | 2020 |
| Early prediction and longitudinal modeling of preeclampsia from multiomics I Marić, K Contrepois, MN Moufarrej, IA Stelzer, D Feyaerts, X Han, ... Patterns 3 (12), 2022 | 23 | 2022 |
| Proteomic signatures predict preeclampsia in individual cohorts but not across cohorts–implications for clinical biomarker studies MS Ghaemi, AL Tarca, R Romero, N Stanley, R Fallahzadeh, A Tanada, ... The Journal of Maternal-Fetal & Neonatal Medicine 35 (25), 5621-5628, 2022 | 22 | 2022 |
| Systematic immunophenotyping reveals sex-specific responses after painful injury in mice VL Tawfik, NA Huck, QJ Baca, EA Ganio, ES Haight, A Culos, S Ghaemi, ... Frontiers in immunology 11, 1652, 2020 | 20 | 2020 |
| GateFinder: projection-based gating strategy optimization for flow and mass cytometry N Aghaeepour, EF Simonds, DJHF Knapp, RV Bruggner, K Sachs, ... Bioinformatics 34 (23), 4131-4133, 2018 | 20 | 2018 |
| Multiomic signals associated with maternal epidemiological factors contributing to preterm birth in low-and middle-income countries CA Espinosa, W Khan, R Khanam, S Das, J Khalid, J Pervin, MP Kasaro, ... Science advances 9 (21), eade7692, 2023 | 13 | 2023 |
| Objective activity parameters track patient-specific physical recovery trajectories after surgery and link with individual preoperative immune states R Fallahzadeh, F Verdonk, E Ganio, A Culos, N Stanley, I Maric, ... Annals of surgery 277 (3), e503-e512, 2023 | 10 | 2023 |
| Alliance for Maternal and Newborn Health Improvement, the Global Alliance to Prevent Prematurity and Stillbirth, and the Prematurity Research Center at Stanford University … F Jehan, S Sazawal, AH Baqui, MI Nisar, U Dhingra, R Khanam, M Ilyas, ... JAMA Netw Open 3 (12), e2029655, 2020 | 9 | 2020 |
| Large-scale correlation network construction for unraveling the coordination of complex biological systems M Becker, H Nassar, C Espinosa, IA Stelzer, D Feyaerts, E Berson, ... Nature Computational Science 3 (4), 346-359, 2023 | 5 | 2023 |
| An artificial bee colony algorithm for mixture model-based clustering AE Culos, H Afshari, JL Andrews Journal Communications in Statistics - Simulation and Computation, 2020 | 5 | 2020 |
Nima AghaeepourStanford UniversityVerified email at stanford.edu
