| DNA computing on surfaces Q Liu, L Wang, AG Frutos, AE Condon, RM Corn, LM Smith Nature 403 (6766), 175-179, 2000 | 803 | 2000 |
| The complexity of stochastic games A Condon Information and Computation 96 (2), 203-224, 1992 | 694 | 1992 |
| Algorithms for graph partitioning on the planted partition model A Condon, RM Karp Random Structures & Algorithms 18 (2), 116-140, 2001 | 547 | 2001 |
| On the undecidability of probabilistic planning and infinite-horizon partially observable Markov decision problems O Madani, S Hanks, A Condon Aaai/iaai 10 (315149.315395), 1999 | 389 | 1999 |
| Interpretable dimensionality reduction of single cell transcriptome data with deep generative models J Ding, A Condon, SP Shah Nature communications 9 (1), 2002, 2018 | 376 | 2018 |
| RNA STRAND: the RNA secondary structure and statistical analysis database M Andronescu, V Bereg, HH Hoos, A Condon BMC bioinformatics 9, 1-10, 2008 | 365 | 2008 |
| Demonstration of a word design strategy for DNA computing on surfaces AG Frutos, Q Liu, AJ Thiel, AMW Sanner, AE Condon, LM Smith, RM Corn Nucleic Acids Research 25 (23), 4748-4757, 1997 | 355 | 1997 |
| On the undecidability of probabilistic planning and related stochastic optimization problems O Madani, S Hanks, A Condon Artificial Intelligence 147 (1-2), 5-34, 2003 | 341 | 2003 |
| On combinatorial DNA word design A Marathe, AE Condon, RM Corn Journal of Computational Biology 8 (3), 201-219, 2001 | 338 | 2001 |
| HotKnots: heuristic prediction of RNA secondary structures including pseudoknots J Ren, B Rastegari, A Condon, HH Hoos Rna 11 (10), 1494-1504, 2005 | 333 | 2005 |
| On Algorithms for Simple Stochastic Games. A Condon Advances in computational complexity theory 13, 51-72, 1990 | 254 | 1990 |
| Secondary structure prediction of interacting RNA molecules M Andronescu, ZC Zhang, A Condon Journal of molecular biology 345 (5), 987-1001, 2005 | 242 | 2005 |
| Efficient parameter estimation for RNA secondary structure prediction M Andronescu, A Condon, HH Hoos, DH Mathews, KP Murphy Bioinformatics 23 (13), i19-i28, 2007 | 241 | 2007 |
| A new algorithm for RNA secondary structure design M Andronescu, AP Fejes, F Hutter, HH Hoos, A Condon Journal of molecular biology 336 (3), 607-624, 2004 | 221 | 2004 |
| Feature based classifiers for somatic mutation detection in tumour-normal paired sequencing data SASPS Jiarui Ding, Ali Bashashati, Andrew Roth, Arusha Oloumi, Kane Tse ... Bioinformatics 28 (2), 167-175, 2012 | 197 | 2012 |
| RNAsoft: a suite of RNA secondary structure prediction and design software tools M Andronescu, R Aguirre-Hernandez, A Condon, HH Hoos Nucleic acids research 31 (13), 3416-3422, 2003 | 188 | 2003 |
| Computational approaches for RNA energy parameter estimation M Andronescu, A Condon, HH Hoos, DH Mathews, KP Murphy RNA 16 (12), 2304-2318, 2010 | 174 | 2010 |
| Designed DNA molecules: principles and applications of molecular nanotechnology A Condon Nature Reviews Genetics 7 (7), 565-575, 2006 | 172 | 2006 |
| DNA models and algorithms for NP-complete problems E Bach, A Condon, E Glaser, C Tanguay Journal of computer and system sciences 57 (2), 172-186, 1998 | 158 | 1998 |
| Strand design for biomolecular computation A Brenneman, A Condon Theoretical Computer Science 287 (1), 39-58, 2002 | 143 | 2002 |
