Ludo Pagie
Ludo Pagie
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Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions
L Guelen, L Pagie, E Brasset, W Meuleman, MB Faza, W Talhout, ...
Nature 453 (7197), 948-951, 2008
Molecular maps of the reorganization of genome-nuclear lamina interactions during differentiation
D Peric-Hupkes, W Meuleman, L Pagie, SWM Bruggeman, I Solovei, ...
Molecular cell 38 (4), 603-613, 2010
Single-cell dynamics of genome-nuclear lamina interactions
J Kind, L Pagie, H Ortabozkoyun, S Boyle, SS De Vries, H Janssen, ...
Cell 153 (1), 178-192, 2013
Chemical warfare between microbes promotes biodiversity
TL Czárán, RF Hoekstra, L Pagie
Proceedings of the National Academy of Sciences 99 (2), 786-790, 2002
Genome-wide maps of nuclear lamina interactions in single human cells
J Kind, L Pagie, SS de Vries, L Nahidiazar, SS Dey, M Bienko, Y Zhan, ...
Cell 163 (1), 134-147, 2015
Constitutive nuclear lamina–genome interactions are highly conserved and associated with A/T-rich sequence
W Meuleman, D Peric-Hupkes, J Kind, JB Beaudry, L Pagie, M Kellis, ...
Genome research 23 (2), 270-280, 2013
Chromatin position effects assayed by thousands of reporters integrated in parallel
W Akhtar, J de Jong, AV Pindyurin, L Pagie, W Meuleman, J de Ridder, ...
Cell 154 (4), 914-927, 2013
Evolutionary consequences of coevolving targets
L Pagie, P Hogeweg
Evolutionary computation 5 (4), 401-418, 1997
Interactions among Polycomb domains are guided by chromosome architecture
B Tolhuis, M Blom, RM Kerkhoven, L Pagie, H Teunissen, M Nieuwland, ...
PLoS genetics 7 (3), e1001343, 2011
High-throughput identification of human SNPs affecting regulatory element activity
J van Arensbergen, L Pagie, VD FitzPatrick, M de Haas, MP Baltissen, ...
Nature genetics 51 (7), 1160-1169, 2019
Glucosylated hydroxymethyluracil, DNA base J, prevents transcriptional readthrough in Leishmania
HGAM van Luenen, C Farris, S Jan, PA Genest, P Tripathi, A Velds, ...
Cell 150 (5), 909-921, 2012
Histone H1 binding is inhibited by histone variant H3. 3
U Braunschweig, GJ Hogan, L Pagie, B Van Steensel
The EMBO journal 28 (23), 3635-3645, 2009
Promoter-intrinsic and local chromatin features determine gene repression in LADs
C Leemans, MCH van der Zwalm, L Brueckner, F Comoglio, T van Schaik, ...
Cell 177 (4), 852-864. e14, 2019
The insulator protein SU (HW) fine-tunes nuclear lamina interactions of the Drosophila genome
JG van Bemmel, L Pagie, U Braunschweig, W Brugman, W Meuleman, ...
PloS one 5 (11), e15013, 2010
A comparison of evolutionary and coevolutionary search
L Pagie, M Mitchell
International Journal of Computational Intelligence and Applications 2 (01 …, 2002
Genome-wide mapping of autonomous promoter activity in human cells
J van Arensbergen, VD FitzPatrick, M de Haas, L Pagie, J Sluimer, ...
Nature biotechnology 35 (2), 145-153, 2017
Massive reshaping of genome–nuclear lamina interactions during oncogene-induced senescence
C Lenain, CA de Graaf, L Pagie, NL Visser, M de Haas, SS de Vries, ...
Genome research 27 (10), 1634-1644, 2017
GRIND: Great integrator differential equations
RJ De Boer, L Pagie
Bioinformatics Group, University of Utrecht, The Netherlands, 1983
High-resolution mapping of heterochromatin redistribution in a Drosophila position-effect variegation model
MJ Vogel, L Pagie, W Talhout, M Nieuwland, RM Kerkhoven, ...
Epigenetics & chromatin 2, 1-18, 2009
Inducible DamID systems for genomic mapping of chromatin proteins in Drosophila
AV Pindyurin, L Pagie, EN Kozhevnikova, J van Arensbergen, ...
Nucleic Acids Research 44 (12), 5646-5657, 2016
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