Zahra Razaghi-Moghadam
Zahra Razaghi-Moghadam
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Kavosh: a new algorithm for finding network motifs
ZRM Kashani, H Ahrabian, E Elahi, A Nowzari-Dalini, ES Ansari, S Asadi, ...
BMC bioinformatics 10 (1), 1-12, 2009
A systematic survey of centrality measures for protein-protein interaction networks
M Ashtiani, A Salehzadeh-Yazdi, Z Razaghi-Moghadam, H Hennig, ...
BMC systems biology 12 (1), 1-17, 2018
The essentiality of reporting Hardy-Weinberg equilibrium calculations in population-based genetic association studies
A Namipashaki, Z Razaghi-Moghadam, N Ansari-Pour
Cell Journal (Yakhteh) 17 (2), 187, 2015
Building blocks of biological networks: a review on major network motif discovery algorithms
A Masoudi-Nejad, F Schreiber, ZRM Kashani
IET systems biology 6 (5), 164-174, 2012
Supervised learning of gene-regulatory networks based on graph distance profiles of transcriptomics data
Z Razaghi-Moghadam, Z Nikoloski
NPJ systems biology and applications 6 (1), 21, 2020
Testis-specific Y-centric protein–protein interaction network provides clues to the etiology of severe spermatogenic failure
N Ansari-Pour, Z Razaghi-Moghadam, F Barneh, M Jafari
Journal of proteome research 15 (3), 1011-1022, 2016
HybridRanker: integrating network topology and biomedical knowledge to prioritize cancer candidate genes
Z Razaghi-Moghadam, R Abdollahi, S Goliaei, M Ebrahimi
Journal of biomedical informatics 64, 139-146, 2016
Identification of the crucial residues in the early insertion of pardaxin into different phospholipid bilayers
M Jafari, F Mehrnejad, R Aghdami, N Chaparzadeh, ...
Journal of Chemical Information and Modeling 57 (4), 929-941, 2017
CytoKavosh: a Cytoscape plug-in for finding network motifs in large biological networks
A Masoudi-Nejad, M Ansariola, Z Razaghi Moghadam Kashani, ...
Public Library of Science 7 (8), e43287, 2012
GeneReg: a constraint-based approach for design of feasible metabolic engineering strategies at the gene level
Z Razaghi-Moghadam, Z Nikoloski
Bioinformatics 37 (12), 1717-1723, 2021
Characterization of effects of genetic variants via genome-scale metabolic modelling
H Tong, A Küken, Z Razaghi-Moghadam, Z Nikoloski
Cellular and Molecular Life Sciences 78 (12), 5123-5138, 2021
CAMIRADA: Cancer microRNA association discovery algorithm, a case study on breast cancer
S Shamsizadeh, S Goliaei, ZR Moghadam
Journal of biomedical informatics 94, 103180, 2019
CytoGTA: A cytoscape plugin for identifying discriminative subnetwork markers using a game theoretic approach
S Farahmand, MH Foroughmand-Araabi, S Goliaei, ...
PloS one 12 (10), e0185016, 2017
GTA: a game theoretic approach to identifying cancer subnetwork markers
S Farahmand, S Goliaei, N Ansari-Pour, Z Razaghi-Moghadam
Molecular BioSystems 12 (3), 818-825, 2016
Supervised learning of gene regulatory networks
Z Razaghi‐Moghadam, Z Nikoloski
Current protocols in plant biology 5 (2), e20106, 2020
Systems genetics of nonsyndromic orofacial clefting provides insights into its complex aetiology
Z Razaghi-Moghadam, A Namipashaki, S Farahmand, N Ansari-Pour
European Journal of Human Genetics 27 (2), 226-234, 2019
Cancerouspdomains: comprehensive analysis of cancer type-specific recurrent somatic mutations in proteins and domains
S Hashemi, A Nowzari Dalini, A Jalali, AM Banaei-Moghaddam, ...
BMC bioinformatics 18, 1-18, 2017
RANGI: a fast list-colored graph motif finding algorithm
AG Rudi, S Shahrivari, S Jalili, ZRM Kashani
IEEE/ACM Transactions on Computational Biology and Bioinformatics 10 (2 …, 2012
A systems biology approach to understanding alcoholic liver disease molecular mechanism: the development of static and dynamic models
L Shafaghati, Z Razaghi-Moghadam, J Mohammadnejad
Bulletin of Mathematical Biology 79 (11), 2450-2473, 2017
Maximization of non-idle enzymes improves the coverage of the estimated maximal in vivo enzyme catalytic rates in Escherichia coli
R Xu, Z Razaghi-Moghadam, Z Nikoloski
Bioinformatics 37 (21), 3848-3855, 2021
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