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Lorena Pantano
Lorena Pantano
Director of Bioinformatics Platform - Harvard Chan School
Verified email at iscb.org - Homepage
Title
Cited by
Cited by
Year
Genomic analyses identify molecular subtypes of pancreatic cancer
P Bailey, DK Chang, K Nones, AL Johns, AM Patch, MC Gingras, ...
Nature 531 (7592), 47-52, 2016
31342016
Bioconda: sustainable and comprehensive software distribution for the life sciences
B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ...
Nature methods 15 (7), 475-476, 2018
7972018
Paternal diet defines offspring chromatin state and intergenerational obesity
A Öst, A Lempradl, E Casas, M Weigert, T Tiko, M Deniz, L Pantano, ...
Cell 159 (6), 1352-1364, 2014
4102014
A myriad of miRNA variants in control and Huntington’s disease brain regions detected by massively parallel sequencing
E Martí, L Pantano, M Banez-Coronel, F Llorens, E Minones-Moyano, ...
Nucleic acids research 38 (20), 7219-7235, 2010
3442010
Genome assembly comparison identifies structural variants in the human genome
R Khaja, J Zhang, JR MacDonald, Y He, AM Joseph-George, J Wei, ...
Nature genetics 38 (12), 1413-1418, 2006
2142006
SeqBuster, a bioinformatic tool for the processing and analysis of small RNAs datasets, reveals ubiquitous miRNA modifications in human embryonic cells
L Pantano, X Estivill, E Martí
Nucleic acids research 38 (5), e34-e34, 2010
2132010
A pathogenic mechanism in Huntington's disease involves small CAG-repeated RNAs with neurotoxic activity
M Bańez-Coronel, S Porta, B Kagerbauer, E Mateu-Huertas, L Pantano, ...
PLoS genetics 8 (2), e1002481, 2012
2042012
HDAC1 modulates OGG1-initiated oxidative DNA damage repair in the aging brain and Alzheimer’s disease
PC Pao, D Patnaik, LA Watson, F Gao, L Pan, J Wang, C Adaikkan, ...
Nature communications 11 (1), 2484, 2020
1182020
A highly expressed miR-101 isomiR is a functional silencing small RNA
F Llorens, M Bańez-Coronel, L Pantano, JA del Río, I Ferrer, X Estivill, ...
BMC genomics 14, 1-14, 2013
1142013
The circulating metabolome of human starvation
ML Steinhauser, BA Olenchock, J O’Keefe, M Lun, KA Pierce, H Lee, ...
JCI insight 3 (16), 2018
1132018
Australian Pancreatic Cancer Genome I
P Bailey, DK Chang, K Nones, AL Johns, AM Patch, MC Gingras, ...
Munzy DM, Fisher WE, Karim SA, Eshleman JR, Hruban RH, Pilarsky C, Morton JP …, 2016
942016
The small RNA content of human sperm reveals pseudogene-derived piRNAs complementary to protein-coding genes
L Pantano, M Jodar, M Bak, JL Ballescŕ, N Tommerup, R Oliva, T Vavouri
Rna 21 (6), 1085-1095, 2015
902015
Fibroblast-derived induced pluripotent stem cells show no common retroviral vector insertions
F Varas, M Stadtfeld, L de Andres-Aguayo, N Maherali, A Di Tullio, ...
Stem cells 27 (2), 300-306, 2009
862009
DEGreport: Report of DEG analysis
L Pantano
New Jersey, NJ: R package version 1 (0), 2019
772019
Circulating miRNAs, isomiRs and small RNA clusters in human plasma and breast milk
M Rubio, M Bustamante, C Hernandez-Ferrer, D Fernandez-Orth, ...
PloS one 13 (3), e0193527, 2018
762018
Targeting acid ceramidase inhibits YAP/TAZ signaling to reduce fibrosis in mice
S Alsamman, SA Christenson, A Yu, NME Ayad, MS Mooring, JM Segal, ...
Science translational medicine 12 (557), eaay8798, 2020
752020
InvFEST, a database integrating information of polymorphic inversions in the human genome
A Martínez-Fundichely, S Casillas, R Egea, M Ramia, A Barbadilla, ...
Nucleic acids research 42 (D1), D1027-D1032, 2014
712014
Molecular, phenotypic, and sample-associated data to describe pluripotent stem cell lines and derivatives
K Daily, SJ Ho Sui, LM Schriml, PJ Dexheimer, N Salomonis, R Schroll, ...
Scientific data 4 (1), 1-10, 2017
652017
A non-biased framework for the annotation and classification of the non-miRNA small RNA transcriptome
L Pantano, X Estivill, E Martí
Bioinformatics 27 (22), 3202-3203, 2011
562011
Maintenance of macrophage transcriptional programs and intestinal homeostasis by epigenetic reader SP140
S Mehta, DA Cronkite, M Basavappa, TL Saunders, F Adiliaghdam, ...
Science immunology 2 (9), eaag3160, 2017
542017
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