PyBoolNet: a python package for the generation, analysis and visualization of boolean networks H Klarner, A Streck, H Siebert Bioinformatics 33 (5), 770-772, 2017 | 117 | 2017 |
Computing maximal and minimal trap spaces of Boolean networks H Klarner, A Bockmayr, H Siebert Natural Computing 14, 535-544, 2015 | 78 | 2015 |
Parameter identification and model ranking of thomas networks H Klarner, A Streck, D Šafránek, J Kolčák, H Siebert International Conference on Computational Methods in Systems Biology, 207-226, 2012 | 40 | 2012 |
Approximating attractors of Boolean networks by iterative CTL model checking H Klarner, H Siebert Frontiers in Bioengineering and Biotechnology 3, 130, 2015 | 33 | 2015 |
Computing Symbolic Steady States of Boolean Networks H Klarner, A Bockmayr, H Siebert Cellular Automata, 561-570, 2014 | 33 | 2014 |
Basins of Attraction, Commitment Sets and Phenotypes of Boolean Networks H Klarner, F Heinitz, S Nee, H Siebert arXiv preprint arXiv:1807.10103, 2018 | 22 | 2018 |
Time series dependent analysis of unparametrized Thomas networks H Klarner, H Siebert, A Bockmayr IEEE/ACM Transactions on Computational Biology and Bioinformatics 9 (5 …, 2012 | 21 | 2012 |
Contributions to the Analysis of Qualitative Models of Regulatory Networks H Klarner www.diss.fu-berlin.de/diss/receive/FUDISS_thesis_000000098522, 2015 | 14 | 2015 |
Designing miRNA-Based Synthetic Cell Classifier Circuits Using Answer Set Programming K Becker, H Klarner, M Nowicka, H Siebert Frontiers in bioengineering and biotechnology 6, 2018 | 9 | 2018 |
Model Integration and Crosstalk Analysis of Logical Regulatory Networks K Thobe, A Streck, H Klarner, H Siebert Computational Methods in Systems Biology, 32-44, 2014 | 9 | 2014 |
Approximating attractors of Boolean networks by iterative CTL model checking. Front. Bioeng. Biotechnol. 3, 130 (2015) H Klarner, H Siebert | 4 | 2015 |
Cellular Automata H Klarner, A Bockmayr, H Siebert Springer International Publishing, Cham, 2014 | 4 | 2014 |
Parameter inference for asynchronous logical networks using discrete time series H Klarner, H Siebert, A Bockmayr Proceedings of the 9th International Conference on Computational Methods in …, 2011 | 4 | 2011 |
Detection of markers for discrete phenotypes H Klarner, E Tonello, L Fontanals, F Janody, C Chaouiya, H Siebert The 12th International Conference on Computational Systems-Biology and …, 2021 | 1 | 2021 |
Erratum to: Computing maximal and minimal trap spaces of Boolean networks H Klarner, A Bockmayr, H Siebert Natural Computing, 1-1, 2017 | | 2017 |