Amarda Shehu

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Citations	3126	1802
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i10-index	79	49

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Kevin MolloyAssistant Professor, Department of Computer Science, James Madison UniversityVerified email at jmu.edu
Daniel VeltriNational Institute of Allergy and Infectious Diseases, NIHVerified email at nih.gov
Uday kamathGeorge Mason UniversityVerified email at gmu.edu
Nasrin AkhterAssistant Professor of Teaching, University at BuffaloVerified email at buffalo.edu
Irina HashmiGeorge Mason UniversityVerified email at gmu.edu
Lydia E. KavrakiRice UniversityVerified email at rice.edu
Nadine KabbaniGeorge Mason UniversityVerified email at gmu.edu
Erion PlakuAssociate Professor, Department of Computer Science, George Mason UniversityVerified email at gmu.edu
Cecilia ClementiProfessor of Physics, Freie Universität BerlinVerified email at fu-berlin.de
Ruth NussinovProfessor and Senior Principal Investigator, National Cancer Institute and Tel Aviv UniversityVerified email at post.tau.ac.il
Rudy ClausenGeorge Mason UniversityVerified email at gmu.edu
Emmanuel SapinGeorge Mason UniversityVerified email at exeter.ac.uk
Ahmed Bin ZamanGeorge Mason UniversityVerified email at gmu.edu
Daniel BarbaraProfessor of Computer Science, George Mason UniversityVerified email at gmu.edu
Buyong MaSchool of Pharmacy, Shanghai Jiaotong UniversityVerified email at sjtu.edu.cn
Kazi Lutful KabirAssistant Professor, Stevens Institute of TechnologyVerified email at stevens.edu
Bassem Shaban SadekProfessor, Department of Pharmacology and Therapeutics, United Arab Emirates UniversityVerified email at uaeu.ac.ae
Shuba, YaroslavBogomoletz Institute of PhysiologyVerified email at biph.kiev.ua
Murat OzKuwait University, Health Science CenterVerified email at hsc.edu.kw
Zahra RajabiPhD MSc in CS @GMU - Principal Applied ScientistVerified email at gmu.edu

Amarda Shehu

Professor of Computer Science, George Mason University

Verified email at gmu.edu - Homepage

Computational Biology Artificial Intelligence Robotics Biophysics Bioinformatics


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Deep learning improves antimicrobial peptide recognition D Veltri, U Kamath, A Shehu Bioinformatics 34 (16), 2740-2747, 2018	222	2018
Principles and overview of sampling methods for modeling macromolecular structure and dynamics T Maximova, R Moffatt, B Ma, R Nussinov, A Shehu PLoS computational biology 12 (4), e1004619, 2016	203	2016
Are nicotinic acetylcholine receptors coupled to G proteins? N Kabbani, JC Nordman, BA Corgiat, DP Veltri, A Shehu, VA Seymour, ... Bioessays 35 (12), 1025-1034, 2013	98	2013
Modeling protein conformational ensembles: From missing loops to equilibrium fluctuations A Shehu, C Clementi, LE Kavraki Proteins: Structure, Function, and Bioinformatics 65 (1), 164-179, 2006	93	2006
Multiscale characterization of protein conformational ensembles A Shehu, LE Kavraki, C Clementi Proteins: Structure, Function, and Bioinformatics 76 (4), 837-851, 2009	79	2009
Basin hopping as a general and versatile optimization framework for the characterization of biological macromolecules B Olson, I Hashmi, K Molloy, A Shehu Advances in Artificial Intelligence 2012, 3-3, 2012	75	2012
Guiding the search for native-like protein conformations with an ab-initio tree-based exploration A Shehu, B Olson The International Journal of Robotics Research 29 (8), 1106-1127, 2010	73	2010
Menthol binding and inhibition of α7-nicotinic acetylcholine receptors A Ashoor, JC Nordman, D Veltri, KHS Yang, L Al Kury, Y Shuba, ... PloS one 8 (7), e67674, 2013	70	2013
A survey of computational methods for protein function prediction A Shehu, D Barbará, K Molloy Big data analytics in genomics, 225-298, 2016	65	2016
Mapping the conformation space of wildtype and mutant H-Ras with a memetic, cellular, and multiscale evolutionary algorithm R Clausen, B Ma, R Nussinov, A Shehu PLoS computational biology 11 (9), e1004470, 2015	61	2015
Multi-objective stochastic search for sampling local minima in the protein energy surface B Olson, A Shehu Proceedings of the International Conference on Bioinformatics, Computational …, 2013	58	2013
Effective automated feature construction and selection for classification of biological sequences U Kamath, K De Jong, A Shehu PloS one 9 (7), e99982, 2014	57	2014
Menthol inhibits 5-HT3 receptor–mediated currents A Ashoor, JC Nordman, D Veltri, KHS Yang, Y Shuba, L Al Kury, B Sadek, ... Journal of Pharmacology and Experimental Therapeutics 347 (2), 398-409, 2013	53	2013
Modeling structures and motions of loops in protein molecules A Shehu, LE Kavraki Entropy 14 (2), 252-290, 2012	52	2012
Improving recognition of antimicrobial peptides and target selectivity through machine learning and genetic programming D Veltri, U Kamath, A Shehu IEEE/ACM transactions on computational biology and bioinformatics 14 (2 …, 2015	50	2015
Off-lattice protein structure prediction with homologous crossover B Olson, K De Jong, A Shehu Proceedings of the 15th annual conference on Genetic and evolutionary …, 2013	48	2013
Probabilistic search and optimization for protein energy landscapes A Shehu, S Aluru, A Singh Handbook of Computational Molecular Biology, 2013	48	2013
Restriction versus guidance in protein structure prediction JA Hegler, J Lätzer, A Shehu, C Clementi, PG Wolynes Proceedings of the National Academy of Sciences 106 (36), 15302-15307, 2009	48	2009
Probabilistic search and energy guidance for biased decoy sampling in ab initio protein structure prediction K Molloy, S Saleh, A Shehu IEEE/ACM transactions on computational biology and bioinformatics 10 (5 …, 2013	46	2013
On the characterization of protein native state ensembles A Shehu, LE Kavraki, C Clementi Biophysical Journal 92 (5), 1503-1511, 2007	46	2007

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