| The gene ontology resource: 20 years and still GOing strong Gene Ontology Consortium Nucleic acids research 47 (D1), D330-D338, 2019 | 3816 | 2019 |
| The Gene Ontology resource: enriching a GOld mine Nucleic acids research 49 (D1), D325-D334, 2021 | 2838 | 2021 |
| Expansion of the Gene Ontology knowledgebase and resources GO Consortium Nucleic Acids Research 45 (D1), D331-D338, 2017 | 1803* | 2017 |
| The evolution of transcriptional regulation in eukaryotes GA Wray, MW Hahn, E Abouheif, JP Balhoff, M Pizer, MV Rockman, ... Molecular biology and evolution 20 (9), 1377-1419, 2003 | 1428 | 2003 |
| The gene ontology knowledgebase in 2023 SA Aleksander, J Balhoff, S Carbon, JM Cherry, HJ Drabkin, D Ebert, ... Genetics 224 (1), iyad031, 2023 | 722 | 2023 |
| Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources S Köhler, L Carmody, N Vasilevsky, JOB Jacobsen, D Danis, JP Gourdine, ... Nucleic acids research 47 (D1), D1018-D1027, 2019 | 720 | 2019 |
| The Monarch Initiative: an integrative data and analytic platform connecting phenotypes to genotypes across species CJ Mungall, JA McMurry, S Köhler, JP Balhoff, C Borromeo, M Brush, ... Nucleic acids research 45 (D1), D712-D722, 2017 | 311 | 2017 |
| Finding our way through phenotypes AR Deans, SE Lewis, E Huala, SS Anzaldo, M Ashburner, JP Balhoff, ... PLoS biology 13 (1), e1002033, 2015 | 236 | 2015 |
| The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species KA Shefchek, NL Harris, M Gargano, N Matentzoglu, D Unni, M Brush, ... Nucleic acids research 48 (D1), D704-D715, 2020 | 234 | 2020 |
| Development and application of a phylogenomic toolkit: resolving the evolutionary history of Madagascar’s lemurs JE Horvath, DW Weisrock, SL Embry, I Fiorentino, JP Balhoff, P Kappeler, ... Genome Research 18 (3), 489-499, 2008 | 195 | 2008 |
| ROBOT: a tool for automating ontology workflows RC Jackson, JP Balhoff, E Douglass, NL Harris, CJ Mungall, JA Overton BMC bioinformatics 20, 1-10, 2019 | 182 | 2019 |
| Time to change how we describe biodiversity AR Deans, MJ Yoder, JP Balhoff Trends in ecology & evolution 27 (2), 78-84, 2012 | 175 | 2012 |
| OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies R Jackson, N Matentzoglu, JA Overton, R Vita, JP Balhoff, PL Buttigieg, ... Database 2021, baab069, 2021 | 170 | 2021 |
| Unification of multi-species vertebrate anatomy ontologies for comparative biology in Uberon MA Haendel, JP Balhoff, FB Bastian, DC Blackburn, JA Blake, Y Bradford, ... Journal of biomedical semantics 5, 1-13, 2014 | 152 | 2014 |
| NeXML: rich, extensible, and verifiable representation of comparative data and metadata RA Vos, JP Balhoff, JA Caravas, MT Holder, H Lapp, WP Maddison, ... Systematic biology 61 (4), 675-689, 2012 | 114 | 2012 |
| Gene Ontology Causal Activity Modeling (GO-CAM) moves beyond GO annotations to structured descriptions of biological functions and systems PD Thomas, DP Hill, H Mi, D Osumi-Sutherland, K Van Auken, S Carbon, ... Nature genetics 51 (10), 1429-1433, 2019 | 109 | 2019 |
| Evolutionary characters, phenotypes and ontologies: curating data from the systematic biology literature WM Dahdul, JP Balhoff, J Engeman, T Grande, EJ Hilton, C Kothari, ... PLoS One 5 (5), e10708, 2010 | 105 | 2010 |
| The teleost anatomy ontology: anatomical representation for the genomics age WM Dahdul, JG Lundberg, PE Midford, JP Balhoff, H Lapp, TJ Vision, ... Systematic biology 59 (4), 369-383, 2010 | 104 | 2010 |
| Phenex: ontological annotation of phenotypic diversity JP Balhoff, WM Dahdul, CR Kothari, H Lapp, JG Lundberg, P Mabee, ... PloS one 5 (5), e10500, 2010 | 104 | 2010 |
| KG-COVID-19: a framework to produce customized knowledge graphs for COVID-19 response JT Reese, D Unni, TJ Callahan, L Cappelletti, V Ravanmehr, S Carbon, ... Patterns 2 (1), 2021 | 99 | 2021 |
Paula M. MabeeBattelle, National Ecological Observatory Network (NEON)Verified email at battelleecology.org
