Hammad Naveed
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Lipid-binding surfaces of membrane proteins: evidence from evolutionary and structural analysis
L Adamian, H Naveed, J Liang
Biochimica et Biophysica Acta (BBA)-Biomembranes 1808 (4), 1092-1102, 2011
Structure-based Analysis of VDAC1 Protein
S Geula, H Naveed, J Liang, V Shoshan-Barmatz
Journal of Biological Chemistry 287 (3), 2179-2190, 2012
Predicting weakly stable regions, oligomerization state, and protein–protein interfaces in transmembrane domains of outer membrane proteins
H Naveed, R Jackups, J Liang
Proceedings of the National Academy of Sciences 106 (31), 12735-12740, 2009
Identification of potential inhibitors of three key enzymes of SARS-CoV2 using computational approach
H Iftikhar, HN Ali, S Farooq, H Naveed, S Shahzad-ul-Hussan
Computers in biology and medicine 122, 103848, 2020
Computational Studies of Membrane Proteins: Models and Predictions for Biological Understanding
J Liang, H Naveed, D Jimenez-Morales, L Adamian, M Lin
Biochimica et Biophysica Acta (BBA)-Biomembranes, 2012
ModuleAlign: module-based global alignment of protein–protein interaction networks
S Hashemifar, J Ma, H Naveed, S Canzar, J Xu
Bioinformatics 32 (17), i658-i664, 2016
Predicting three-dimensional structures of transmembrane domains of β-barrel membrane proteins
H Naveed, Y Xu, R Jackups Jr, J Liang
Journal of the American Chemical Society 134 (3), 1775-1781, 2012
CoCiter: An Efficient Tool to Infer Gene Function by Assessing the Significance of Literature Co-Citation
N Qiao, Y Huang, H Naveed, CD Green, JDJ Han
PLoS ONE 8 (9), e74074, 2013
Mechanisms of Regulating Cell Topology in Proliferating Epithelia: Impact of Division Plane, Mechanical Forces, and Cell Memory
Y Li, H Naveed, S Kachalo, LX Xu, J Liang
PLoS ONE 7 (8), e43108, 2012
Engineered oligomerization state of OmpF protein through computational design decouples oligomer dissociation from unfolding.
H Naveed, D Jimenez-Morales, J Tian, V Pasupuleti, LJ Kenney, J Liang
Journal of molecular biology, 2012
High-resolution structure prediction of β-barrel membrane proteins
W Tian, M Lin, K Tang, J Liang, H Naveed
Proceedings of the National Academy of Sciences 115 (7), 1511-1516, 2018
Outer membrane protein folding and topology from a computational transfer free energy scale
M Lin, D Gessmann, H Naveed, J Liang
Journal of the American Chemical Society 138 (8), 2592-2601, 2016
HECNet: a hierarchical approach to enzyme function classification using a Siamese Triplet Network
SA Memon, KA Khan, H Naveed
Bioinformatics 36 (17), 4583-4589, 2020
Improving the resistance of a eukaryotic β-barrel protein to thermal and chemical perturbations
D Gessmann, F Mager, H Naveed, T Arnold, S Weirich, D Linke, J Liang, ...
Journal of molecular biology 413 (1), 150-161, 2011
Mechanisms of Regulating Tissue Elongation in Drosophila Wing: Impact of Oriented Cell Divisions, Oriented Mechanical Forces, and Reduced Cell Size
Y Li, H Naveed, S Kachalo, LX Xu, J Liang
PLoS ONE, 2014
The structure of the TOM core complex in the mitochondrial outer membrane
T Bausewein, H Naveed, J Liang, S Nussberger
Biological Chemistry 401 (6-7), 687-697, 2020
Geometric order in proliferating epithelia: impact of rearrangements and cleavage plane orientation
H Naveed, Y Li, S Kachalo, J Liang
2010 Annual International Conference of the IEEE Engineering in Medicine and …, 2010
Mechanical Model of Geometric Cell and Topological Algorithm for Cell Dynamics from Single-Cell to Formation of Monolayered Tissues with Pattern
S Kachalo, H Naveed, Y Cao, J Zhao, J Liang
PLOS One, 2015
Weakly Stable Regions and Protein-Protein Interactions in Beta-Barrel Membrane Proteins
H Naveed, J Liang
Current Pharmaceutical Design, 2014
An integrated structure-and system-based framework to identify new targets of metabolites and known drugs
H Naveed, US Hameed, D Harrus, W Bourguet, ST Arold, X Gao
Bioinformatics 31 (24), 3922-3929, 2015
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