Reconstruction of metabolic networks from genome data and analysis of their global structure for various organisms H Ma, AP Zeng Bioinformatics 19 (2), 270-277, 2003 | 688 | 2003 |
The Edinburgh human metabolic network reconstruction and its functional analysis H Ma, A Sorokin, A Mazein, A Selkov, E Selkov, O Demin, I Goryanin Molecular systems biology 3 (1), 135, 2007 | 535 | 2007 |
The connectivity structure, giant strong component and centrality of metabolic networks HW Ma, AP Zeng Bioinformatics 19 (11), 1423-1430, 2003 | 527 | 2003 |
Cell-free chemoenzymatic starch synthesis from carbon dioxide T Cai, H Sun, J Qiao, L Zhu, F Zhang, J Zhang, Z Tang, X Wei, J Yang, ... Science 373 (6562), 1523-1527, 2021 | 479 | 2021 |
MEMOTE for standardized genome-scale metabolic model testing C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ... Nature biotechnology 38 (3), 272-276, 2020 | 402 | 2020 |
SynTReN: a generator of synthetic gene expression data for design and analysis of structure learning algorithms T Van den Bulcke, K Van Leemput, B Naudts, P van Remortel, H Ma, ... BMC bioinformatics 7, 1-12, 2006 | 400 | 2006 |
An extended transcriptional regulatory network of Escherichia coli and analysis of its hierarchical structure and network motifs HW Ma, B Kumar, U Ditges, F Gunzer, J Buer, AP Zeng Nucleic acids research 32 (22), 6643-6649, 2004 | 249 | 2004 |
Constructing a synthetic pathway for acetyl-coenzyme A from one-carbon through enzyme design X Lu, Y Liu, Y Yang, S Wang, Q Wang, X Wang, Z Yan, J Cheng, C Liu, ... Nature communications 10 (1), 1378, 2019 | 231 | 2019 |
Hierarchical structure and modules in the Escherichia coli transcriptional regulatory network revealed by a new top-down approach HW Ma, J Buer, AP Zeng BMC bioinformatics 5, 1-10, 2004 | 220 | 2004 |
Decomposition of metabolic network into functional modules based on the global connectivity structure of reaction graph HW Ma, XM Zhao, YJ Yuan, AP Zeng Bioinformatics 20 (12), 1870-1876, 2004 | 190 | 2004 |
Compartmentalization of the Edinburgh human metabolic network T Hao, HW Ma, XM Zhao, I Goryanin BMC bioinformatics 11, 1-12, 2010 | 122 | 2010 |
Centrality, network capacity, and modularity as parameters to analyze the core-periphery structure in metabolic networks MR Da Silva, H Ma, AP Zeng Proceedings of the IEEE 96 (8), 1411-1420, 2008 | 102 | 2008 |
Metabolic engineering of Bacillus subtilis for chiral pure meso-2,3-butanediol production J Fu, G Huo, L Feng, Y Mao, Z Wang, H Ma, T Chen, X Zhao Biotechnology for biofuels 9, 1-14, 2016 | 98 | 2016 |
Systematic design and in vitro validation of novel one-carbon assimilation pathways X Yang, Q Yuan, H Luo, F Li, Y Mao, X Zhao, J Du, P Li, X Ju, Y Zheng, ... Metabolic Engineering 56, 142-153, 2019 | 83 | 2019 |
Construction, Model-Based Analysis, and Characterization of a Promoter Library for Fine-Tuned Gene Expression in Bacillus subtilis D Liu, Z Mao, J Guo, L Wei, H Ma, Y Tang, T Chen, Z Wang, X Zhao ACS synthetic biology 7 (7), 1785-1797, 2018 | 81 | 2018 |
Adaptive laboratory evolution enhances methanol tolerance and conversion in engineered Corynebacterium glutamicum Y Wang, L Fan, P Tuyishime, J Liu, K Zhang, N Gao, Z Zhang, X Ni, ... Communications biology 3 (1), 217, 2020 | 78 | 2020 |
Human metabolic network reconstruction and its impact on drug discovery and development H Ma, I Goryanin Drug discovery today 13 (9-10), 402-408, 2008 | 76 | 2008 |
Complete depolymerization of PET wastes by an evolved PET hydrolase from directed evolution L Shi, P Liu, Z Tan, W Zhao, J Gao, Q Gu, H Ma, H Liu, L Zhu Angewandte Chemie 135 (14), e202218390, 2023 | 75 | 2023 |
Phylogenetic comparison of metabolic capacities of organisms at genome level HW Ma, AP Zeng Molecular phylogenetics and evolution 31 (1), 204-213, 2004 | 74 | 2004 |
AmtB-mediated NH3 transport in prokaryotes must be active and as a consequence regulation of transport by GlnK is mandatory to limit futile cycling of NH4+/NH3 FC Boogerd, H Ma, FJ Bruggeman, WC van Heeswijk, ... FEBS letters 585 (1), 23-28, 2011 | 71 | 2011 |