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Jeremy J Yang
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Cited by
Year
The origin of intermediary metabolism
HJ Morowitz, JD Kostelnik, J Yang, GD Cody
Proceedings of the National Academy of Sciences 97 (14), 7704-7708, 2000
3862000
Unexplored therapeutic opportunities in the human genome
TI Oprea, CG Bologa, S Brunak, A Campbell, GN Gan, A Gaulton, ...
Nature reviews Drug discovery 17 (5), 317-332, 2018
3572018
DrugCentral: online drug compendium
O Ursu, J Holmes, J Knockel, CG Bologa, JJ Yang, SL Mathias, SJ Nelson, ...
Nucleic acids research, gkw993, 2016
2742016
Pharos: collating protein information to shed light on the druggable genome
DT Nguyen, S Mathias, C Bologa, S Brunak, N Fernandez, A Gaulton, ...
Nucleic acids research 45 (D1), D995-D1002, 2017
2532017
DrugCentral 2021 supports drug discovery and repositioning
S Avram, CG Bologa, J Holmes, G Bocci, TB Wilson, DT Nguyen, ...
Nucleic acids research 49 (D1), D1160-D1169, 2021
1552021
Stigmata: An algorithm to determine structural commonalities in diverse datasets
NE Shemetulskis, D Weininger, CJ Blankley, JJ Yang, C Humblet
Journal of chemical information and computer sciences 36 (4), 862-871, 1996
1401996
DrugCentral 2018: an update
O Ursu, J Holmes, CG Bologa, JJ Yang, SL Mathias, V Stathias, ...
Nucleic acids research 47 (D1), D963-D970, 2019
1282019
Associating drugs, targets and clinical outcomes into an integrated network affords a new platform for computer‐aided drug repurposing
TI Oprea, SK Nielsen, O Ursu, JJ Yang, O Taboureau, SL Mathias, ...
Molecular informatics 30 (2‐3), 100-111, 2011
1282011
TCRD and Pharos 2021: mining the human proteome for disease biology
TK Sheils, SL Mathias, KJ Kelleher, VB Siramshetty, DT Nguyen, ...
Nucleic Acids Research 49 (D1), D1334-D1346, 2021
1152021
Badapple: promiscuity patterns from noisy evidence
JJ Yang, O Ursu, CA Lipinski, LA Sklar, TI Oprea, CG Bologa
Journal of cheminformatics 8, 1-14, 2016
922016
Analysis and hit filtering of a very large library of compounds screened against Mycobacterium tuberculosis
S Ekins, T Kaneko, CA Lipinski, J Bradford, K Dole, A Spektor, K Gregory, ...
Mol. BioSyst. 6 (11), 2316-2324, 2010
812010
Structural simplification of bioactive natural products with multicomponent synthesis. 3. Fused uracil-containing heterocycles as novel topoisomerase-targeting agents
NM Evdokimov, S Van Slambrouck, P Heffeter, L Tu, B Le Calve, ...
Journal of medicinal chemistry 54 (7), 2012-2021, 2011
782011
Structural Simplification of Bioactive Natural Products with Multicomponent Synthesis. 3. Fused Uracil-Containing Heterocycles as Novel Topoisomerase-Targeting Agents
NM Evdokimov, S Van Slambrouck, P Heffeter, L Tu, B Le Calvé, ...
Journal of Medicinal Chemistry, 2011
782011
Drug target ontology to classify and integrate drug discovery data
Y Lin, S Mehta, H Küçük-McGinty, JP Turner, D Vidovic, M Forlin, A Koleti, ...
Journal of biomedical semantics 8, 1-16, 2017
752017
edge2vec: Representation learning using edge semantics for biomedical knowledge discovery
Z Gao, G Fu, C Ouyang, S Tsutsui, X Liu, J Yang, C Gessner, B Foote, ...
BMC bioinformatics 20, 1-15, 2019
592019
A machine learning platform to estimate anti-SARS-CoV-2 activities
GB Kc, G Bocci, S Verma, MM Hassan, J Holmes, JJ Yang, S Sirimulla, ...
Nature Machine Intelligence 3 (6), 527-535, 2021
542021
How to illuminate the druggable genome using pharos
T Sheils, SL Mathias, VB Siramshetty, G Bocci, CG Bologa, JJ Yang, ...
Current protocols in bioinformatics 69 (1), e92, 2020
352020
The CARLSBAD database: a confederated database of chemical bioactivities
SL Mathias, J Hines-Kay, JJ Yang, G Zahoransky-Kohalmi, CG Bologa, ...
Database 2013, bat044, 2013
352013
TIN-X: target importance and novelty explorer
DC Cannon, JJ Yang, SL Mathias, O Ursu, S Mani, A Waller, SC Schürer, ...
Bioinformatics 33 (16), 2601-2603, 2017
292017
An overview of the challenges in designing, integrating, and delivering BARD: a public chemical-biology resource and query portal for multiple organizations, locations, and …
A de Souza, JA Bittker, DL Lahr, S Brudz, S Chatwin, TI Oprea, A Waller, ...
Journal of biomolecular screening 19 (5), 614-627, 2014
292014
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Articles 1–20